Shewanella avicenniae: JYB87_14925
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Entry
JYB87_14925 CDS
T07845
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
savi
Shewanella avicenniae
Pathway
savi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYB87_14925 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
savi01007
]
JYB87_14925 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
savi03016
]
JYB87_14925 (lysS)
Enzymes [BR:
savi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JYB87_14925 (lysS)
Amino acid related enzymes [BR:
savi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JYB87_14925 (lysS)
Transfer RNA biogenesis [BR:
savi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JYB87_14925 (lysS)
Prokaryotic type
Other AARSs
JYB87_14925 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QSX33016
LinkDB
All DBs
Position
complement(3375734..3377233)
Genome browser
AA seq
499 aa
AA seq
DB search
MTEHLDENKLIAERRAKLDQIRTSSPANGHPNTFRRSHKAAELQAEFGDKTKEELESLGF
TTAIAGRVMAKRGPFLVLQDVSGRIQAYAEKEVQADLKERYKGLDIGDIIGVKGQLHLSG
KGELYVHMDEYQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEESRNAFKMRSQVVG
AIRSFMESKEFMEVETPMMHVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVVGGF
ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADFKDLMDLTEEMLSSIALKLTGDTKLP
YGEHVIDFGGPYARMSMLEAIQHYNPDNAKIQAMTYEEVKDLEFMRTLGKEVGLDIESFW
TCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRNDDNEFITDRFEFFIGGREVANG
FSELNDAEDQDSRFKAQVAAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLF
TNSHTIRDVILFPAMRPQA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacatttggatgaaaacaaactgatcgcggaacgtcgcgctaagctggaccaa
atccgcactagcagtcctgctaatggtcacccgaacacttttcgtcgtagccataaggcg
gctgagctgcaagctgagtttggcgataagactaaggaagagctggaatctctgggcttc
accaccgcgattgcgggccgtgtgatggcaaaacgtgggcctttcttggtgctgcaagac
gtgtctggccgcattcaagcgtacgctgaaaaagaagtgcaagctgacttgaaagagcgc
tacaaaggtttggatatcggcgacatcatcggtgttaaaggccaactgcacttgtctggt
aaaggcgagctgtatgtgcatatggatgaatatcaactgctgaccaaagcactgcgtcca
ttgccagaaaaattccacggtctgaccgaccaagagatgcgttaccgtcaacgttatgtt
gatttgattgtgaacgaagaatctcgtaatgcgtttaaaatgcgttcacaagtggttggt
gctatccgtagctttatggaaagcaaagagtttatggaagtggaaacccctatgatgcat
gtcatcccaggcggtgcttctgcgcgtccatttattactcaccataacgcgctggacatc
gatatgtacctgcgtattgcgccagaattgtacctgaagcgtttggtagtaggtggtttt
gaacgcgtgttcgaaatcaaccgtaacttccgtaacgaaggtttgtcaccacgtcataac
ccagaattcaccatgatggaattctatatggcgtacgcagactttaaagatctgatggat
ctgaccgaagagatgttgtcatcaattgcgttgaaactgactggcgacactaaactgcca
tacggtgaacatgtgattgatttcggtggcccatatgcgcgcatgagcatgttggaagcg
attcaacactacaatccagacaatgccaaaatccaagcaatgacctacgaggaggttaaa
gatctggaatttatgcgcactttgggtaaagaagtcggtttggatatcgaaagcttctgg
acctgtggtcaattgctggaagagatcttcggtgaaaccgccgagcctaagctgatgcaa
ccgaccttcatcactggctacccagcggacatctcgccactggcacgtcgtaacgatgac
aacgaattcatcactgaccgttttgaattcttcatcggtggccgcgaagtggccaacggc
ttcagtgagttgaacgacgcagaagaccaagacagccgctttaaagcacaggttgctgcc
aaagatgcgggtgatgatgaagcgatgttctacgatgcagactacatcactgcactggaa
cacggtttaccaccaacagcgggtcaaggtattggtatcgaccgtctggtgatgttgttc
accaacagccacaccatccgtgatgtgatcttgttcccggcgatgcgcccacaagcgtaa
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