Shewanella avicenniae: JYB87_15270
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Entry
JYB87_15270 CDS
T07845
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
savi
Shewanella avicenniae
Pathway
savi00550
Peptidoglycan biosynthesis
savi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JYB87_15270 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
savi01003
]
JYB87_15270 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
savi01011
]
JYB87_15270 (mrcB)
Enzymes [BR:
savi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
JYB87_15270 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JYB87_15270 (mrcB)
Glycosyltransferases [BR:
savi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
JYB87_15270 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
savi01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
JYB87_15270 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QSX33072
UniProt:
A0ABX7QNN1
LinkDB
All DBs
Position
complement(3450070..3452376)
Genome browser
AA seq
768 aa
AA seq
DB search
MAKTTKKTQGKRSNSSPKTSLWRKVWSISWKLAIILAAVLAVYSIYLDQIIARKFEGQKW
YLPAQIFSRSMALYPGAPVSHQQLIDELKLLGYRKVANPRQVGEFSASSTKVDIWRRPFL
HPEGKQPEQRVLISFDSNGVTAVSRGEDNRQLAVFHLEPVLLDRIVTGDGEDRLFVPTTE
MPPLVIEALILTEDRSFYEHFGVNPLAIARAAFVNITAGRTVQGGSTLTQQLAKNFFLSS
ERSLIRKVREALMALIIDFRYSKEEILEAYLNEVYMGQDHSRAIHGMGLASQFYFGRPIG
ELTLAQQAFLVAVIKGPSYYNPWRYDQRAQQRRDLVLRLLMEGGKITAKQYQLAASSPLS
LRDSERPVHQKLPAFFAQVKQELRDRYGEALLKQSGVKVYTTLDPLAQEAAEKAVLQTMK
SLNAEKYQLQTGMVVTDRYSAGIAAMVGDRVPSYYGFNRATDIRRPIGSLVKPFVYATAL
SQPNNYNLVTPLKDEPITLKNERGETWSPQNDDRQFKGQVPLLTALKDSMNVPTVNLGMA
LGVDAVATTLKQVGWSETINPYPSMLLGAVNGSPLMVAQMYQTIASRGRYRQLAAVTQVL
DKDNKPIQATPLAQHQAIDPNVDYLVQYAMTKVVESGTAKKLGEAFPNDMLAGKTGTSND
RRDSWFAGMDERNVAVIWVGRDDNGKTSLYGSSGAMAVYRQFLGNRAPLSLRLPPESGIV
QGYFDRDSGLAKGADCSPVVKVPALAESYHPTENCGKPKSWWQRLLSN
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacaaccaaaaaaactcagggaaagcgcagcaatagcagcccaaaaacgtca
ttgtggcgcaaggtgtggtcaattagctggaagctcgccatcattcttgctgccgtgctg
gcggtttatagcatctatcttgatcagatcatcgcccgcaaatttgaggggcaaaagtgg
tatctgccggcgcagattttcagtcgctcaatggcgctgtatcccggtgcgccggtgagc
caccagcagctgatcgatgaactaaaactgctcggctatcgcaaggttgctaatccgcgt
caagtgggcgaattttcggcatctagcaccaaggtggatatttggcggcggccatttttg
catccagaaggcaaacaaccagagcaacgggtgcttatcagttttgatagcaacggggtg
acggcggtcagccgtggcgaagacaatcggcagctggccgtgttccatctcgaacctgtg
ttacttgatcgcatcgtcaccggtgatggtgaagataggctatttgtgccaaccaccgaa
atgccacctttggtcattgaagcgctgatattgaccgaagaccgtagcttctacgagcat
tttggggtaaatccgctggccattgctcgggcggcgtttgtcaacattaccgcagggcgc
accgtgcaaggtggctcaaccttaacccagcagttagccaaaaacttcttcctctccagc
gagcgctcgctcattcgtaaagtccgtgaagcgttaatggcgctgattatcgatttccgt
tacagcaaagaggagatcctcgaagcctatctgaatgaagtttatatggggcaagatcat
agccgcgccattcacggcatgggcttggcgtcgcagttctattttggccgacccatcggc
gagctgaccctcgcacaacaggcgtttttagttgcagtgattaaaggtccttcctattac
aacccgtggcgctatgatcagcgggctcagcaacgtcgcgacttggtgctacggctgttg
atggaaggcggcaaaatcaccgcaaaacaataccaactggcggcatcatcaccgttatca
ctgcgcgattccgagcgtcctgtacaccaaaagttgccagcgttttttgcccaagttaaa
caggaactgcgtgaccgatacggcgaagccttgctaaagcagtcgggggtgaaggtctat
accacactggatcctttagcgcaggaagcggctgaaaaagccgtgctgcagacgatgaaa
tcactcaatgccgaaaagtatcaattgcaaacgggcatggtggttaccgatcgatatagc
gccggcattgccgcaatggtgggggaccgagtgccgtcctactacggttttaaccgtgca
accgatattcgccgtccaattggttctttggtgaaaccgtttgtgtatgccactgctttg
tcgcaaccgaataactataacttggtgaccccactgaaagatgagccgattaccttgaag
aatgagcgcggcgaaacgtggtcaccgcaaaacgacgatcgccaattcaaaggtcaagtg
ccattgctgacagccttaaaagactcgatgaacgtacccacggttaatttggggatggcg
cttggggtggatgcggttgccaccaccctaaaacaagtgggctggagtgaaacaattaat
ccgtatccatccatgctgttgggggcggtgaatggctcgccattaatggtagcacagatg
taccaaaccattgcatcgcgtgggcgctaccgtcaattggcggcggtcactcaagtgttg
gataaagataataagccgattcaagccacgccgttggcgcaacatcaagccatcgacccg
aatgtggattacttagtgcaatatgctatgaccaaggttgtcgagtcgggtacggccaaa
aaactgggtgaagcctttcctaatgatatgcttgcgggaaaaaccggcaccagtaacgat
cggcgtgactcttggtttgccggcatggatgagcgaaatgtggcggtcatttgggttggc
cgcgatgataacggcaaaacctcgctttacggcagcagtggtgcgatggcggtgtatcgc
cagtttttaggtaatcgagcaccattatcgctgcggttaccgccagagagcggcatagtg
cagggctactttgatcgtgacagcggcttggctaaaggcgctgattgcagtcccgttgtg
aaagtccccgcgttggcagaaagctatcatccgacagaaaactgcggtaaacctaagtca
tggtggcagcggttattgagtaactaa
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