Shewanella avicenniae: JYB87_15655
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Entry
JYB87_15655 CDS
T07845
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
savi
Shewanella avicenniae
Pathway
savi03030
DNA replication
savi03430
Mismatch repair
savi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYB87_15655 (ssb)
03430 Mismatch repair
JYB87_15655 (ssb)
03440 Homologous recombination
JYB87_15655 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
savi03032
]
JYB87_15655 (ssb)
03400 DNA repair and recombination proteins [BR:
savi03400
]
JYB87_15655 (ssb)
03029 Mitochondrial biogenesis [BR:
savi03029
]
JYB87_15655 (ssb)
DNA replication proteins [BR:
savi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JYB87_15655 (ssb)
DNA repair and recombination proteins [BR:
savi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
JYB87_15655 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
JYB87_15655 (ssb)
Mitochondrial biogenesis [BR:
savi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
JYB87_15655 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
TFIIA
Motif
Other DBs
NCBI-ProteinID:
QSX33142
LinkDB
All DBs
Position
complement(3554605..3555294)
Genome browser
AA seq
229 aa
AA seq
DB search
MASRGINKVILVGNLGQDPEVRYMPNGNAVANITVATSDSWKDQQGQQQERTEWHRVVFF
GKLAEIAGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYTTEIVVDQSGTMQMLGGRNQGQQ
GGQAAGNMGGGYAPQGGDNNYGAAPQQQYAAPQQQQPQQQYNAPQAAAPAYQQPQQNTGY
APKPQQNSGYAPKPQAAQRPAPQQPAPAQQPQQNYTPDLDDGWDDDIPF
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtattaacaaagtcattctggtgggtaaccttggacaagatccagaa
gtacgttacatgccaaacggcaacgccgttgccaatatcacggttgctaccagtgattct
tggaaagaccaacaaggtcagcaacaagagcgtaccgaatggcatcgcgtggtgtttttc
ggcaagctagctgaaattgctggagaatacctgcgcaaaggttcgcaagtttatctggaa
ggtaaactgcaaacccgcaagtggaaagaccaaagtggtcaagaccgttacaccactgaa
atcgtggtcgatcaaagcggtactatgcagatgcttggtggccgtaatcaaggtcaacaa
ggtggtcaagccgctggcaacatgggtggcggttatgcgccgcaaggtggcgacaataac
tacggtgcagcacctcaacaacaatatgccgcgccacagcaacagcaaccacagcagcaa
tataatgcaccacaagctgccgcacctgcgtatcagcagccacagcaaaacactggttat
gcgccaaaaccgcaacaaaacagcggttacgcacctaagccacaagcggctcaacgtcca
gcgccacagcagcctgcgccagcacagcaaccacaacagaactataccccagatctggat
gatggttgggatgatgatattccattttga
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integrated database retrieval system
