Shewanella avicenniae: JYB87_15790
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Entry
JYB87_15790 CDS
T07845
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
savi
Shewanella avicenniae
Pathway
savi03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYB87_15790 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
savi03032
]
JYB87_15790 (dnaB)
Enzymes [BR:
savi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
JYB87_15790 (dnaB)
DNA replication proteins [BR:
savi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JYB87_15790 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
GvpD_P-loop
divDNAB
nSTAND3
DUF5410
Motif
Other DBs
NCBI-ProteinID:
QSX33168
UniProt:
A0ABX7QNY5
LinkDB
All DBs
Position
3591482..3592888
Genome browser
AA seq
468 aa
AA seq
DB search
MPQPAAFSSRDKRKDAQTEALKLPPHSIEAEQSVLGGLMLDAEAWDKVAELVVREDFYSR
AHKLIFTAMQSLTERGQPIDLITVSEQLELTDELEDAGGFAYLGEIAKNTPSAGNILSYS
AIVRERAVVREMIRVAHEIADAGYNPEGRDSSALLDLAESKVFKIAEQRANANEGPEGIK
SILEKTVDKIEQLYNNPHNGVTGVSSGFGDLDKMTAGFQSGDLVIVAARPSMGKTTFAMN
LCENAALSEDKPVLIFSLEMPSEQIMMRMLASVGRVDQTRIRTGQLDDDDWARVSSTMGL
MLEKGKMYIDDSSGLTPTEVRSRARRIAREHGGLSMIMVDYLQLMQVPALADNRTLEIAE
ISRSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEV
YHDDSPDKGTAEIIIGKQRNGPIGRVRLTFQGKFSRFDNYAGPQFEED
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgccacagcctgctgctttcagctcacgtgacaaacgcaaagacgcacaaacagaagcg
ttgaaattaccgcctcactccatagaagcagagcaatctgtgttggggggcttaatgctg
gatgccgaagcttgggacaaagtggccgaattggtggtgcgtgaagatttttattctcgc
gcccacaagctgatttttaccgccatgcaaagtttgaccgaacgcggtcaaccaatcgat
ttgattacggtttctgagcaacttgagctaaccgatgagcttgaagatgccggtggcttt
gcctatctcggcgaaattgccaaaaacaccccaagcgcgggcaatattctgtcctactcc
gccattgtgcgtgaacgcgctgtggtgcgcgagatgatccgtgttgcccacgaaattgcc
gatgcgggttacaaccctgaaggacgtgactccagcgccctgctcgatctcgctgaaagc
aaagtctttaaaattgctgagcaacgcgccaatgccaacgaaggtccagaggggatcaaa
tcgattctggaaaaaaccgtcgacaagattgagcagttgtataacaacccgcacaacggg
gtgacaggggtgtcttctggctttggcgatctcgacaaaatgaccgctggcttccaatcc
ggtgacttggtgattgtcgcggcgcgtccatcgatgggtaaaaccacctttgcgatgaac
ctgtgtgaaaacgctgcgttaagtgaagataaaccggtactgatcttcagcttagagatg
ccgtccgaacagatcatgatgcgtatgctcgcgtctgtcggccgcgttgaccaaactcgt
attcgtactggtcagctagatgatgacgattgggcgcgagtgtcctccaccatgggcttg
atgctcgaaaaaggcaaaatgtatatcgacgacagctcagggttaacgcccactgaagtg
cgcagccgtgcccgtcgtattgcccgcgaacacggtggcttatcgatgatcatggtcgac
tacttgcagttgatgcaagtacccgcgttggccgacaaccgtacgctagaaattgccgaa
atctcgcgctcactaaaagcgttagccaaagaactcgaaattccggtgatcgcgctgtca
cagttgaaccgctcgctcgaacaacgagccgataagcgcccagtgaactcggatcttcgt
gaatcaggctctatcgagcaggacgcggatttgattatgtttatttaccgtgatgaggtt
tatcacgatgactctccagataaaggcactgccgaaatcattattggtaaacagcgtaac
ggccccattgggcgggtgcgtttgaccttccaaggtaaattctcacgctttgacaattat
gctggccctcagtttgaagaagactag
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