Shewanella avicenniae: JYB87_16250
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Entry
JYB87_16250 CDS
T07845
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
savi
Shewanella avicenniae
Pathway
savi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JYB87_16250 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
savi03400
]
JYB87_16250 (priA)
Enzymes [BR:
savi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JYB87_16250 (priA)
DNA repair and recombination proteins [BR:
savi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JYB87_16250 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_22
AAA_30
WHD_PriA
AbiEi_4
TrwB_AAD_bind
Zn_ribbon_6
AAA_19
AAA_16
DUF5816
HypA
Motif
Other DBs
NCBI-ProteinID:
QSX33255
UniProt:
A0ABX7QQS8
LinkDB
All DBs
Position
3694855..3697050
Genome browser
AA seq
731 aa
AA seq
DB search
MPQFAEIALPVPLRQNFSYRIPDTITTAITQGVRVEVPFGQQKMIGLVTALTDSCALPPQ
KIRNINRVLDGESLLSEPLYKLTEWAARYYFCSHGMMLSQAIPVALRKGASAQPETIRYY
ALTEKGEQADSNSLGRAHAQKKIVELLKGSEVTVEEAQALGLSPSALKSLRERDWIDIFE
QPVTTDISWRDELKMGEAPHRLNKQQAVAVAALNHQQGFNCTLLEGVTGSGKTEVYLALI
ETVLKAGHQALVLVPEIGLTPQTINRFKHRFHVTIAVLHSGLTDKQRLDAWRQARSGEAA
IIIGTRSALFTPMRWPGVIILDEEHDSSFKQQEGVGYHARDLAVMRGNLENIPVVLGSAT
PSLESLHNAIAGRYHHLQLSERAGTAVKARQGVIDIRNQPLRGGVSQALFNEMRLHLQAG
NQVLLFLNRRGFAPALLCHECGYLHECDRCDAFFTLHQSLGEIRCHHCGNQYAIPRQCHN
CGSTMLQGQGIGTEQLEGILSKEFPEYPVVRIDRDTTSRKGSLEQQLNAIHRGSYRILVG
TQMLAKGHHFPDVTLVALLDVDGALFSADFRAPERFGQLYTQVAGRAGRASKPGTVLLQT
HQSDNPLLQDLLQRGYSEFARSQLEERKLALLPPVWHMVLVRAEAHHAEDAENFLRAFAE
HFGQQPSLEIIGPMPAPLDRKAGFHRRHLLVQAADRRLIQQLFEHALPLLEQLPQARRCR
WSIDRDPQDLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaatttgccgaaatcgcccttccagtcccattacggcaaaattttagctatcgc
attcctgacaccatcaccaccgcaatcacccaaggggtgcgggtagaagtgccttttggc
caacaaaaaatgattggcctagtgaccgcattaaccgacagttgcgctctaccgccacaa
aaaattcgcaatatcaaccgagtattggatggcgaatctttgctcagtgaaccactttat
aaactcaccgagtgggcagcaagatattatttttgtagtcacggcatgatgttatcgcaa
gcgattccagtcgcgttgcgcaaaggcgccagtgcccagccagaaaccatccgctattac
gccttgactgaaaaaggcgagcaggcagatagcaacagtcttggccgcgcccacgcacag
aaaaaaattgtcgagctgctcaaaggcagcgaagtcaccgttgaagaagcgcaagcatta
ggactcagccccagtgcattgaaatcgctgcgcgagcgcgactggattgacatatttgaa
caaccggtgaccaccgatatcagttggcgtgatgagttaaagatgggcgaagcgccacat
cggctcaacaaacaacaagccgttgctgtggcagcactgaatcatcaacaaggctttaat
tgtaccttgcttgaaggggtgacaggctctggcaaaactgaagtctacttggcattgatt
gaaaccgtgctgaaagcgggtcatcaagccttggtgctggtgccagaaattggcctaacc
ccacaaaccatcaaccgctttaaacatcgttttcatgtgacgattgcagtgctgcactct
ggcctgaccgataaacagcggctcgatgcttggcgccaagcccgcagtggtgaagcagcc
atcatcatcggcactcgctcggcgctgtttacccctatgcgctggccgggagtgatcatt
cttgatgaagagcatgatagcagctttaagcagcaggaaggggtgggttaccacgcccgc
gatttagccgtaatgcgcggcaaccttgaaaacattccggtggtgctcggtagtgcaacc
ccgtcactggagtcgctgcacaacgccattgccggacgctaccatcacctgcagctgagc
gaacgcgccggtactgcggtcaaagcccgccaaggggtgattgatattcgtaatcagcca
ttgcgtggcggcgtatcgcaagcactatttaacgagatgcggctgcacctgcaagctggt
aaccaagtactgctgtttctcaatcgccgtggctttgcgcctgcgctgctatgccatgaa
tgtggctatctgcacgaatgcgatcgctgcgatgccttttttacgctgcatcaatctttg
ggtgaaattcgctgccaccactgtggtaatcagtatgcaattccgcgtcagtgccacaac
tgcggcagcaccatgctgcaagggcaagggattggcacagagcagctcgaaggcattctc
agcaaagagtttccagagtacccggtggtgcggattgaccgcgacaccaccagccgcaaa
ggctctttggagcaacaactgaatgcaattcatcgcggcagctatcggattttggttggc
acgcaaatgctcgccaaaggccaccattttcctgatgtgaccttggttgccctgctcgac
gtggatggcgcattgtttagcgcagattttcgcgcgccggaacggtttggccagttgtat
acccaagtggcaggccgtgccggccgcgccagcaaaccggggactgtactgctgcaaacc
catcaaagtgataacccgttgctgcaagatctactgcaacgcggctacagcgaattcgca
cggtcgcagttagaggaacgtaagctcgccctgctaccacctgtgtggcatatggtgctg
gtacgtgccgaagcccatcacgcagaagatgccgaaaactttctcagggcgtttgccgaa
catttcggccagcagccatcgctagagatcattggtccgatgcctgcgccgctcgatcga
aaagccggatttcatcgccgccatctgttggtacaagccgccgaccgccggttgatccaa
caactgtttgaacatgctctgccactgttagagcagctaccgcaggcacgccgttgccgg
tggagcatcgatcgcgatccgcaagatctgctgtaa
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