Shewanella avicenniae: JYB87_17940
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Entry
JYB87_17940 CDS
T07845
Name
(GenBank) molybdopterin-dependent oxidoreductase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
savi
Shewanella avicenniae
Pathway
savi00630
Glyoxylate and dicarboxylate metabolism
savi00680
Methane metabolism
savi01100
Metabolic pathways
savi01120
Microbial metabolism in diverse environments
savi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JYB87_17940
09102 Energy metabolism
00680 Methane metabolism
JYB87_17940
Enzymes [BR:
savi01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
JYB87_17940
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
TAT_signal
PA-IL
Motif
Other DBs
NCBI-ProteinID:
QSX33564
LinkDB
All DBs
Position
complement(4048713..4051565)
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AA seq
950 aa
AA seq
DB search
MRLTRKTDQAPVAAEKPSLGLNRRQFLKSAGLATGGIAAASMLGAGMMRRAEATEVPHDA
PIEVKRTICSHCSVGCGIYAEVQNGVWTGQEPAFDHPFNRGGHCAKGASLREIGHGGKRN
KYPMKLEGGKWKRLSWEQAINEIGDKMLKIREESGPDSVYFMGSAKFSNEQSYLYRKLAA
MWGTNNVDHSARICHSTTVAGVANTWGYGAQTNSFNDMHNSKLMLFVGSNPSEAHPVAMQ
HILEGKERGAKVIVVDPRFTRTAAKADEYVHIRPGTDIPFIYGLLWHIFENGWEDKSFIQ
SRVYGMERIREEVAKYTPEEVENVAGVKKEQMYRVAKMLNEHKPGTIVWCMGGTQHHVGN
ANTRSYCILQLALGNMGVVGGGTNIFRGHDNVQGATDFGLLFDNLPGYYGLTSGAWGHWS
RVWQLDPEWVNGRFDQGEYLGKKPQTSPGIPCSRWHDGVLEDKEKIAQKDNIRLAFFWGQ
SVNTETRGREVREALNKMDTVVVVDPHPTMAAIMPQRQDGIYILPACTQFETYGSVTASN
RSLQWRDKVIEPHFESLPDHTIMYKLAKKWGVDKEMFKNIKVNGDEPLVEDVTREFNRGM
WTIGYTGQSPERLKMHQQNWGTFDFDSLEAPGGPAKGETYGLPWPCWGTPEMKHPGTQIL
YRTDREVRFGGGNFRARYGVEHNGTNILAEGSFSKGSEIKDGYPEFTDQMLKQLGWWDDL
TAEEKTAAEGKNWKTDLSGGIQRVAIAHGCIPFGNAKARCVVWNFPDDIPLHREPLYTPR
RDLVSKYPTYEDRMVHRLPTLYKSIQDQDFSKDFPLVLTSGRLVEYEGGGEETRSNPWLA
ELQQEMFIELNPADAADRGLRDGDNVWVHGPEGAKIKVKAMVTPRVIAGECFMPYHFAGI
FEGESLVGKYPEGTVPYIQGESANTVLTYGYDVVTQMQETKSSLCQITKA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaactcgtaaaactgaccaagcaccagttgcagctgaaaagccatcactgggg
cttaaccgtcgtcagttcctcaaatcagcaggcttagcaaccggtggtatcgccgctgct
tcaatgctgggtgcaggaatgatgcgtcgggctgaagcgactgaagtgccacatgatgca
ccaatcgaagtaaaacgtactatctgttctcactgttctgttggctgtggtatttatgct
gaagttcagaatggcgtgtggaccggtcaagagccagcatttgaccatcctttcaaccgt
ggtggacactgtgctaaaggtgcttcgctgcgtgaaatcggacatggtggtaaacgcaac
aagtacccaatgaaactcgaaggcggcaagtggaaacgcttgagctgggaacaagcgatt
aacgaaatcggcgacaagatgctgaaaattcgtgaagagtctggtcctgattctgtgtac
ttcatgggtagcgccaagttctctaacgaacaatcatatctttaccgtaagttagccgcg
atgtggggcaccaacaacgtcgaccactctgcgcgtatttgtcactctaccactgtagcc
ggtgtagcaaacacttggggttacggtgcgcaaaccaactcatttaacgacatgcacaac
tctaagttgatgttgttcgtgggttctaacccgagtgaagctcacccagtggctatgcag
cacattctggaaggtaaagagcgcggtgccaaagttattgtggttgatccacgtttcacc
cgtactgcagcgaaagctgacgagtacgtgcatatccgtcctggtaccgacattcctttc
atctacggtctgctgtggcacatttttgaaaatggttgggaagacaagagcttcattcaa
tcacgtgtttacggtatggaacgcattcgcgaagaagtggccaagtacacccctgaagag
gtggaaaacgttgctggcgtgaagaaagagcagatgtaccgcgtagcgaaaatgttgaac
gaacacaaacctggcaccatcgtttggtgtatgggtggtactcagcaccacgtaggtaat
gcgaacacccgttcatactgtatcctgcagttggcactgggtaacatgggcgttgtgggc
ggcggtactaacattttccgtggtcacgataacgtacagggcgcaaccgacttcggtctg
ctgttcgataacctgcctggttactatggcctgacatcaggcgcttggggccactggtct
cgcgtgtggcaactggatccagaatgggttaatggccgtttcgaccaaggtgaatacctc
ggcaagaaaccacaaacctcacctggtattccatgctctcgttggcatgacggtgtactg
gaagataaagaaaagattgcacagaaagacaatatccgtttggcgttcttctggggtcag
tctgttaacaccgaaacccgtggtcgtgaagtgcgtgaagcactgaacaagatggacacc
gttgttgtggtcgatccacacccaaccatggcggcgatcatgccacagcgtcaagatggc
atctatatcctgccagcctgtactcaatttgaaacctatggttctgtaactgcgtctaac
cgttctctgcaatggcgtgacaaagtgattgaaccgcacttcgaatctttgccagaccat
accatcatgtataagttggcgaagaaatggggcgtcgacaaagagatgttcaagaacatc
aaagtcaacggtgatgagccattggttgaagatgttacccgcgaattcaaccgcggtatg
tggactatcggttacacaggtcaaagccctgaacgtctgaaaatgcaccaacaaaactgg
ggcactttcgacttcgattctctggaagccccaggcggcccagcgaaaggtgaaacctat
ggtctgccttggccatgttggggtactcctgagatgaaacatccaggtacccaaattctg
tatcgtactgaccgtgaagttcgcttcggtggtggtaacttccgtgctcgttatggtgta
gaacacaatggcactaacattttggccgaaggttctttctctaaaggcagtgaaattaaa
gacggttatccagaatttaccgaccagatgctgaagcaacttggctggtgggatgacctg
actgctgaagaaaaaacggcggctgaaggtaaaaactggaaaactgacttgtcaggtggt
atccagcgtgttgcgattgcacacggctgtatcccattcggtaatgcgaaagcacgttgt
gtggtgtggaacttcccagatgatattccattgcaccgcgagcctttgtacacacctcgt
cgtgacttggtgagcaagtatccgacctatgaagaccgcatggttcatcgtctgcctacc
ctgtataaatcaattcaggatcaggacttctctaaagacttcccattagtactgacttct
ggtcgtctggtggaatacgaaggtggtggtgaagagacccgttctaacccatggttggct
gaactgcagcaagagatgttcatcgaactgaaccctgctgacgcagcagatcgtggctta
cgtgacggtgacaatgtgtgggttcatggtccggaaggcgccaaaatcaaggttaaggca
atggtcactcctcgcgttatcgcgggtgaatgtttcatgccttatcacttcgccggtatt
tttgaaggcgaaagcctggtaggtaaatatcctgaaggcactgtgccttacattcagggt
gaatctgccaataccgtactgacttacggctacgacgtggtgacacagatgcaggaaact
aaatcctcgctgtgccaaatcactaaagcataa
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