Staphylococcus aureus subsp. aureus Mu3 (MRSA/hetero-VISA): SAHV_1240
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Entry
SAHV_1240 CDS
T00588
Name
(GenBank) DNA topoisomerase I topA homologue
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
saw
Staphylococcus aureus subsp. aureus Mu3 (MRSA/hetero-VISA)
Brite
KEGG Orthology (KO) [BR:
saw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saw03032
]
SAHV_1240
03400 DNA repair and recombination proteins [BR:
saw03400
]
SAHV_1240
Enzymes [BR:
saw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SAHV_1240
DNA replication proteins [BR:
saw03032
]
Prokaryotic type
DNA Topoisomerases
SAHV_1240
DNA repair and recombination proteins [BR:
saw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAHV_1240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Zn_ribbon_RPB9
Auto_anti-p27
Cys_rich_CPXG
Motif
Other DBs
NCBI-ProteinID:
BAF78123
LinkDB
All DBs
Position
1314926..1316995
Genome browser
AA seq
689 aa
AA seq
DB search
MADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDTEDNYEPKYITIRGK
GPVVKELKKHAKKAKNVFLASDPDREGEAIAWHLSKILELEDSKENRVVFNEITKDAVKE
SFKNPREIEMNLVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFKPEEYWTIEGEFRYKKSKFNAKFLHYKNKPFKLKTKKDVEKITAALDGDQFEITN
VTKKEKTRNPANPFTTSTLQQEAARKLNFKARKTMMVAQQLYEGIDLKKQGTIGLITYMR
TDSTRISDTAKAEAKQYITDKYGESYTSKRKASGKQGDQDAHEAIRPSSTMRTPDDMKSF
LTKDQYRLYKLIWERFVASQMAPAILDTVSLDITQGDIKFRANGQTIKFKGFMTLYVETK
DDSDSEKENKLPKLEQGDKVTATQIEPAQHYTQPPPRYTEARLVKTLEELKIGRPSTYAP
TIDTIQKRNYVKLESKRFVPTELGEIVHEQVKEYFPEIIDVEFTVNMETLLDKIAEGDIT
WRKVIDGFFSSFKQDVERAEEEMEKIEIKDEPAGEDCEVCGSPMVIKMGRYGKFMACSNF
PDCRNTKAIVKSIGVKCPKCNDGDVVERKSKKNRVFYGCSKYPECDFISWDKPIGRDCPK
CNQYLVENKKGKTTQVICSNCDYKEAAQK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ttggcagataatttagtcattgttgaatcgcctgcaaaagcaaaaaccattgaaaagtat
ttaggtaagaaatataaagttatagcttcaatgggacacgtcagagacttaccaagaagt
caaatgggtgtcgacactgaagataattacgaaccaaaatatataacaatacgcggaaaa
ggtcctgttgtaaaagaattgaaaaaacatgcaaaaaaagcgaaaaacgtctttctcgca
agtgaccccgaccgtgaaggtgaagcaattgcttggcatttatcaaaaattttagagctt
gaagattctaaagaaaatcgcgttgttttcaacgaaataactaaagacgctgttaaagaa
agttttaaaaatcctagagaaattgaaatgaacttagtcgatgcacaacaagcgcgtcga
atattagatagattggttggctataacatctcgccagttctatggaaaaaagtgaaaaaa
ggtttgtcagcgggtcgagttcaatctgttgcacttcgtttagtcattgaccgtgaaaat
gaaattcgaaactttaaaccagaagaatattggactattgaaggagaatttagatacaaa
aaatcaaaattcaatgctaaattccttcattataaaaataaaccttttaaattaaaaacg
aaaaaagatgttgagaaaattacagctgcactagatggagatcaattcgaaattacaaac
gtgactaaaaaagaaaaaacgcgtaatccagcaaacccatttacaacttctacattacaa
caagaggcggcacgtaaattaaactttaaagcaagaaaaacaatgatggtcgcacaacaa
ttatatgaaggtatagatttgaaaaaacaaggtacgattggtttaataacatatatgaga
accgattctacacgtatttcagatactgccaaagctgaagcaaaacagtatataactgat
aaatacggtgaatcttacacttctaaacgtaaagcatcagggaaacaaggtgaccaagat
gcccatgaggctattagaccttcaagtactatgcgtacgccagatgatatgaagtcattt
ttgacgaaagaccaataccgattatacaaattaatttgggaacgatttgttgctagtcaa
atggctccagcaatacttgatacagtctcattagacataacacaaggtgacattaaattt
agagcgaatggtcaaacaatcaagtttaaaggatttatgacactttatgtagaaactaaa
gatgatagtgatagcgaaaaggaaaataaactgcctaaattagagcaaggtgataaagtc
acagcaactcaaattgaaccagctcaacactatacacaaccacctccaagatatactgag
gcgagattagtaaaaacactagaagaattgaaaattgggcgaccatcaacttatgcaccg
acaatagatacgattcaaaagcgtaactatgtcaaattagaaagtaagcgttttgttcct
actgagttgggagaaatagttcatgaacaagtgaaagaatacttcccagagattattgat
gtggaattcacagtgaatatggaaacgttacttgataagattgcagaaggcgacattaca
tggagaaaagtaatagacggtttctttagtagctttaaacaagatgttgaacgtgctgaa
gaagagatggaaaagattgaaatcaaagatgagccagccggtgaagactgtgaagtttgt
ggttctcctatggttataaaaatgggacgctatggtaagttcatggcttgctcaaacttc
ccggattgtcgtaatacaaaagcgatagttaagtctattggtgttaaatgtccaaaatgt
aatgatggtgacgtcgtagaaagaaaatctaaaaagaatcgtgtcttttatggatgttcg
aaatatcctgaatgcgactttatctcttgggataagccgattggaagagattgtccaaaa
tgtaaccaatatcttgttgaaaataaaaaaggcaagacaacacaagtaatatgttcaaat
tgcgattataaagaggcagcgcagaaataa
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