Staphylococcus aureus subsp. aureus Mu3 (MRSA/hetero-VISA): SAHV_1545
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Entry
SAHV_1545 CDS
T00588
Name
(GenBank) hypothetical protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
saw
Staphylococcus aureus subsp. aureus Mu3 (MRSA/hetero-VISA)
Brite
KEGG Orthology (KO) [BR:
saw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saw03019
]
SAHV_1545
03009 Ribosome biogenesis [BR:
saw03009
]
SAHV_1545
Enzymes [BR:
saw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAHV_1545
Messenger RNA biogenesis [BR:
saw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAHV_1545
Ribosome biogenesis [BR:
saw03009
]
Prokaryotic type
rRNA helicases
SAHV_1545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAF78428
LinkDB
All DBs
Position
complement(1669822..1671168)
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AA seq
448 aa
AA seq
DB search
MAKHPFEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLL
PLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRC
NAQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMIDLGLIEDVDYIAARLEDNAN
IAVFSATIPQQLQPFLNKYLSHPEYVAVDSKKQNKKNIEFFLIPTKGAAKVEKTLNLIDI
LNPYLCIIFCNSRDNANDLARSLNEAGIKVGMIHGGLTPRERKQQMKRIRNLEFQYVIAS
DLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHNISLIED
RGFVFNTVDIKDGELKEVKAHNQRQARMRKDDHLTNQVKDKVRSKIKNKVKPGYKKKFKQ
EVEKMKRQERKQFSKQQNRQKRKQNKKG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacatccattcgaacaatttaatctagaatctagtttaattgacgctgtgaaa
gaccttaattttgaaaaaccaactgaaattcagaatcgaattattccaagaatactaaag
agaacaaatttaattggtcaatctcaaacgggtacagggaaatctcatgcatttttatta
ccattaatgcagttaattgatagtgaaataaaagaaccacaagcaatcgtagttgcacca
acaagagaacttgcacaacaactatacgatgcagcgaaccatttaagccaatttaaagct
ggtgtttcagttaaagtttttattggtggtacagatatagagaaagatagacaacgttgt
aatgcacaaccacaattgattataggcacccctactagaattaatgacttagctaaaacg
ggacatttacatgtgcacttagcatcatatttagttattgatgaagcggatcttatgatt
gacttaggattaattgaagatgtagattacattgctgcaagattggaagataatgcaaat
attgcggtgtttagtgctacaattccacaacagttacaaccatttttaaataaatattta
agtcatccagaatatgtagctgtcgacagtaaaaaacaaaataaaaagaacatcgaattc
tttttaatacctactaaaggtgcagctaaagttgaaaaaactttaaatttaattgatata
ctaaatccatacttatgtattattttctgtaatagtagagataatgcaaatgatttagca
cgttcactaaatgaagctggtattaaagttggtatgattcatggtggtttaacgccacgt
gaacgtaaacaacaaatgaaacgtatacgtaatttagaattccaatacgttattgccagc
gatttagcatctcgtggtattgatattgaaggtgttagtcatgtcatcaattttgatgtg
ccaaatgatattgacttctttacgcatagagttggacgaactggtcgtgggaattataaa
ggtgtagcaattacgctttatagtcctgatgaagaacacaatatttcattaatagaagat
cgcggttttgtattcaatactgttgatattaaagatggtgagttaaaagaagttaaagcg
cacaatcagcgtcaagcaagaatgcgcaaagatgaccatttaactaatcaagtgaaggac
aaagttcgaagtaaaattaaaaacaaagttaaaccaggttataagaagaaatttaaacaa
gaagttgaaaaaatgaaacgtcaagagcgtaaacaatttagtaagcagcaaaatagacaa
aaacgtaagcaaaacaaaaaaggttag
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