Natronosalvus rutilus: NGM29_03315
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Entry
NGM29_03315 CDS
T08271
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sawl
Natronosalvus rutilus
Pathway
sawl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sawl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NGM29_03315 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sawl03400
]
NGM29_03315 (uvrB)
DNA repair and recombination proteins [BR:
sawl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NGM29_03315 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NGM29_03315 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
UB2H
AAA_30
DUF8048
DUF87
Motif
Other DBs
NCBI-ProteinID:
UTF54324
UniProt:
A0A9E7SU35
LinkDB
All DBs
Position
complement(674412..676466)
Genome browser
AA seq
684 aa
AA seq
DB search
MSDTRGPLQPDRPEAAKPFAVDAPFEPAGDQPEAIEQLAAGFADGMDRQTLLGVTGSGKT
NTVSWVMEEVQEPTLVIAHNKTLAAQLYEEFRNLFPDNAVEYFVSYYDYYQPEAYVEQTD
TYIDKDASINDEIDRLRHSATRSLLTRDDVIVVASVSAIYGLGDPRNYVEMAMRLETGEE
IGRDDLLKRLVDLNYERNDVDFSQGTFRVRGDTIEIFPMYGRYAVRVEFWGDEIDRMLKV
DPLEGEVKSTEPAVLVHPAEHYSMPETRLEQAVEEIRDDLDSRISYFERKGDLLAAQRIE
ERTTFDLEMMEETGYCSGIENYSVYLDDRDPGDTPYTLLDYFPDDFLTVVDESHVTLPQV
RGQYAGDKSRKDSLVENGFRLPTAYDNRPLTFEEFEERTDKTLYVSATPGDYEREESDQI
VEQIVRPTHLVDPEVEVAPATGQVDDLMDRIDARIDRDERTLVTTLTKRMAEDLTEYLEE
AGVDVAYMHDETDTLERHEIVRSLRLGEIDVLVGINLLREGLDIPEVSLVAILDADQEGF
LRSETTLVQTMGRAARNVNGEVVLYADEVSNAMESAIEETRRRREIQREFNEEHGHEPMT
IEKEVGETNLPGSKTDTSSVAGTDLEDEEDAARYVAELEDRMQEAASNLEFELAADIRDR
LREVREEFELEGKDEGVAPPAEEF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacactcgaggccccctccagccggatcgacccgaggccgcgaaaccgttcgcg
gtcgacgccccgttcgaacccgcgggcgaccagcccgaggcgatcgagcagctggcggcg
ggcttcgccgacggcatggaccgccagacgctgctcggcgtgacggggtcgggcaagacc
aacaccgtctcgtgggtgatggaagaggtccaggagccgacgctggtcatcgcccacaac
aagaccctggccgcccagctctacgaggagttccggaacctgttccccgacaacgccgtc
gagtacttcgtctcctactacgactactaccagcccgaggcctacgtcgagcagaccgac
acctacatcgacaaggacgcctcgatcaacgacgagatcgaccgccttcgtcactcggcg
acccggtccctgctcacgcgagacgacgtaatcgtcgtcgcctcggtctcggctatctac
ggactcggtgacccgcgaaactacgtcgagatggcaatgcgcctcgagacgggcgaggag
attggtcgcgacgacctcctcaagcgcctggtcgacctgaactacgagcgcaacgacgtc
gacttctcccaggggacgttccgggttcgcggggacaccatcgagatcttcccgatgtac
ggccgctacgccgtccgcgtcgagttctggggcgacgagatcgaccgcatgctgaaggtc
gacccgctcgagggcgaggtcaagagcaccgaacccgccgtcctcgtccaccctgccgag
cattactcgatgcccgagacgcgcctcgagcaggccgtcgaggagattcgggacgacctc
gattcgcgaatctcgtacttcgagcgcaagggcgatctactcgccgcccagcgcatcgag
gaacgcaccacgttcgacctcgagatgatggaggagaccggctactgttcgggcatcgag
aactactcggtgtacctcgacgaccgcgaccccggtgatacgccctacaccctgctggat
tacttcccggacgacttcctcaccgtggtcgacgagtcccacgtcactctgccccaggtt
cggggccagtacgccggcgacaagtcccggaaggactcgctggtcgagaacggctttcga
ctcccgaccgcctacgacaaccgtccgctgacattcgaggagttcgaggagcgaaccgac
aaaacgctgtacgtctccgcgacgccgggcgactacgagcgcgaggagagcgaccagatc
gtcgaacagatcgttcgccccacccacctcgtcgaccccgaggtcgaggtcgcccccgcg
accggccaggtcgacgacctcatggaccgcatcgacgcacgtattgaccgcgacgagcgc
accctcgtgacgacgctgaccaaacggatggccgaggacctgaccgagtacctcgaggag
gccggcgtcgatgtcgcctatatgcacgacgagacggacaccctcgagcgccacgagatc
gtgcgctccctccgcctcggagagatcgacgtcctcgtcggcatcaacctcctgcgagag
gggctggacattcccgaggtctccctcgtggcgatcctagacgccgaccaggagggattc
ctccgctcggagaccacgctcgtccagacgatggggcgggcggcccggaacgtcaacggc
gaggtcgtgctgtacgctgacgaggtctcgaacgcgatggagtcggccattgaggagacg
cggcgccgccgcgagattcaacgcgagttcaacgaggaacacggccacgaaccgatgacc
atcgagaaagaagttggggagacgaacctcccggggagcaagaccgacacctcgagcgtc
gccggtacggacctcgaggacgaggaggacgccgcccgatacgtcgccgaactcgaggac
cggatgcaggaggcagcgagcaatctcgagttcgaactcgcggcggatatccgggaccgg
ttgcgagaagtgcgcgaggaattcgaactcgaggggaaggacgagggggtcgccccgccg
gccgaggagttttag
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integrated database retrieval system
