Natronosalvus rutilus: NGM29_12650
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Entry
NGM29_12650 CDS
T08271
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sawl
Natronosalvus rutilus
Pathway
sawl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sawl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NGM29_12650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sawl03019
]
NGM29_12650
03009 Ribosome biogenesis [BR:
sawl03009
]
NGM29_12650
04131 Membrane trafficking [BR:
sawl04131
]
NGM29_12650
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sawl04147
]
NGM29_12650
Messenger RNA biogenesis [BR:
sawl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NGM29_12650
Ribosome biogenesis [BR:
sawl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NGM29_12650
Membrane trafficking [BR:
sawl04131
]
SNARE
SNARE associated proteins
Others
NGM29_12650
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NGM29_12650
Exosome [BR:
sawl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NGM29_12650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
TIP49
AAA_5
AAA_33
AAA_22
NPHP3_N
AAA_14
RNA_helicase
nSTAND3
AAA_7
AAA_28
AAA_3
Mg_chelatase
IstB_IS21
AAA_lid_PRS2_C
DUF815
ABC_tran
TsaE
NB-ARC
AAA_18
AAA_11
AAA_30
Sigma54_activat
Zeta_toxin
Parvo_NS1
AAA_17
AAA_24
PhoH
ATPase
SLFN-g3_helicase
bpMoxR
Bac_DnaA
ATP-synt_ab
Zot
Histidinol_dh
Motif
Other DBs
NCBI-ProteinID:
UTF52630
UniProt:
A0A9E7STK5
LinkDB
All DBs
Position
complement(2644532..2646796)
Genome browser
AA seq
754 aa
AA seq
DB search
MKLTVRPLKQKDAGRGLAAIDRSSMSELGLENGDYILIEGNGEDRAVARVWPGYPEDEGR
GVIRIDGRIRQEAGVGIDDRVTVEKADVKQASSVSVALPQNLRIRGDIGPLVRDKLSGQA
VTEGQTVPFSLSFGPMASSGQSVPLKIASTSPKGTVVITDSTEIQISETPAEQISAGGGA
GQEGIPNVTYEDIGGLDSELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTL
MAKAVANEIDAHFQTISGPEIMSKYYGESEEKLREVFEEAEENAPAIVFVDELDSIAAKR
EDAGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPD
KDGRTEILQVHTRGMPLSDSVDLDQYAENTHGFVGADLESLTKEAAMNALRRIRPELDLE
QEEIDAEVLERLRVTEKDFKEALKGITPSALREVFVEVPNVTWNDVGGLMQTKDRLQETI
QWPLDYPEVFQAMDMEAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVG
ESEKGVREVFEKARSNAPTVIFFDEIDSIATERGSGQMDSGVGERVVSQLLTELDGLEEL
EDVVVIATTNRPDLIDTALLRPGRLDRHIHVPVPDEEARKKIFEVHTRDKPLAEGIDLEW
LASETEGYVGADIEAVCREASMAATREFIETVDPEDIGEAVGNVRVSEAHFEQALEEVPP
SVTQETRERYEEIESQFQSSEPQPKEEQVGRTFQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccgtcagacccctcaagcaaaaagacgcaggtcgcggactggccgccatc
gaccgctcgtcgatgagcgaactcggcctcgagaacggcgattacatcctgatcgagggc
aacggcgaggaccgggccgtcgcccgcgtctggccggggtatcccgaggacgagggccga
ggcgtcatccgcatcgacggtcgcatccgccaagaggccggcgtcggcatcgacgaccgc
gtcactgtcgagaaagccgacgtgaaacaggcctcgagcgtctccgtggcgcttccccag
aacctccggatccgcggcgacatcggcccgctcgttcgcgacaagctgagcggccaggcc
gtcaccgagggccagacggtacccttctcgctctcgttcggtccgatggccagttccggc
cagtcggtccccctgaagatcgcctcgacgtccccgaaagggacggtcgtgatcacggac
tcgacggagatccagatctccgagacgcctgccgaacagatcagcgccggcggcggcgct
ggccaggaagggatcccgaacgtcacctacgaggacatcggtggtctcgacagcgaactc
gatcaggttcgcgagatgatcgagttgccgatgcgccacccggaactgttccagcagctc
ggcatcgaaccgccgaagggcgttctcctgcacggtccgccgggaacggggaagaccctg
atggccaaagccgtcgccaacgagatcgatgcccacttccagacgatctccggcccggag
atcatgtcgaagtactacggcgaatccgaagagaagcttcgcgaggtgttcgaggaagcc
gaggagaacgccccggcgatcgtcttcgtcgacgaactcgactcgatcgcggccaagcgc
gaggacgccggcggcgacgtcgaacgacgcgtcgtcgcccaactgctctcgctgatggac
ggcctcgaggaacgcggacgcgtcaccgtcatcgccgcgaccaaccgcgttgacgccatc
gaccccgcgctccgacgtggcggccggttcgaccgcgagatcgagatcggcgtcccggac
aaggacggacggaccgaaatcctgcaggttcacacccgcgggatgcccctctctgacagc
gtcgacctcgaccagtacgccgagaacacccacggtttcgtcggcgccgacctcgagagc
ctgacgaaggaggcggcgatgaacgccctccggcgcattcgccccgaactcgacctcgaa
caggaggagatcgacgccgaggtactcgaacgcctgcgcgtcaccgagaaggacttcaag
gaggcgctcaagggcatcacgccgtcggcgctccgcgaggtgttcgtcgaagtgccaaac
gtcacctggaacgacgtcggcggtctcatgcagacgaaagatcggctccaggagaccatc
cagtggccgctcgactaccccgaggtgttccaggcaatggacatggaggccgcgaagggc
gtcctcatgtacggcccgccggggactggtaagacgctgctcgcgaaggccgtcgccaac
gaggcccagtcgaacttcatctcgatcaagggtcccgaactgctgaacaagtacgtcggc
gagtccgagaagggcgtccgcgaggtcttcgagaaggcccggtcgaacgcaccgaccgtg
atcttcttcgacgagatcgactccatcgcgaccgaacgcggcagcggccagatggactcc
ggcgtcggcgagcgggtcgtctcccaactactgaccgaactcgacggcctcgaggaactc
gaggacgtggtcgtcatcgcaacgacgaaccggccggacctgatcgacacggccctgctc
cggcccggacggctcgaccgtcacatccacgtgcccgtgccggacgaggaggctcgcaag
aagatcttcgaggtccacacccgcgacaagccactggccgagggaatcgacctcgagtgg
ctcgcgagcgagactgagggctacgtcggcgccgacatcgaggctgtctgccgcgaggcg
tcgatggccgcgactcgcgagttcatcgagacggtcgatcccgaagacatcggcgaggct
gtcgggaacgtccgggtcagcgaggcccacttcgagcaagcgctcgaggaggtcccgccg
agcgtgacccaggaaacgcgcgagcgctacgaggagatcgaatcgcagttccagtcgagc
gaaccccagccgaaagaagagcaggtcggccggacgttccagtaa
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