Natronosalvus rutilus: NGM29_14015
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Entry
NGM29_14015 CDS
T08271
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
sawl
Natronosalvus rutilus
Pathway
sawl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sawl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NGM29_14015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sawl03021
]
NGM29_14015
03019 Messenger RNA biogenesis [BR:
sawl03019
]
NGM29_14015
Transcription machinery [BR:
sawl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NGM29_14015
RNA polymerase I system
NGM29_14015
Messenger RNA biogenesis [BR:
sawl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NGM29_14015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Ribosomal_uL24m-like
DUF6093
KOW4_SPT5
SH3_KIN17_C
Motif
Other DBs
NCBI-ProteinID:
UTF52887
UniProt:
A0A9E7SUH7
LinkDB
All DBs
Position
2906467..2906904
Genome browser
AA seq
145 aa
AA seq
DB search
MPIYAVKTTASQEQTVADMIINREEPDVHAALAPDSLTSYVMVESDGHAVLERILEDIPH
ARTVIPGESDISEVEHFLSPKPDVEGIAEGDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSDER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctacgctgtcaagacgacggccagccaggaacagaccgtcgccgacatgatc
atcaaccgcgaggagccggacgtacacgccgcgcttgcccccgactcgctgacctcttac
gtaatggtcgagtccgacggccacgccgttctcgagcgaatcctggaggacattccccac
gctcgaacggtcatcccgggcgagtccgacatctcggaggtcgagcacttcctctcgccc
aagccggacgtcgaggggatcgccgagggcgacatcgtcgaactcatcgccgggccgttc
aagggcgagaaggcgcaggttcagcgcatcgacgagggcaaggaccaggtgaccgtcgag
ttgtacgaggcgacggtcccgattccggtgacagttcgcggggaccagattcgcgttctg
gattccgacgagcgatag
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