Natronosalvus rutilus: NGM29_15945
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Entry
NGM29_15945 CDS
T08271
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sawl
Natronosalvus rutilus
Pathway
sawl03420
Nucleotide excision repair
sawl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sawl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NGM29_15945
03430 Mismatch repair
NGM29_15945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sawl03400
]
NGM29_15945
Enzymes [BR:
sawl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NGM29_15945
DNA repair and recombination proteins [BR:
sawl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NGM29_15945
MMR (mismatch excision repair)
Other MMR factors
NGM29_15945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
Herpes_ori_bp
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
UTF53244
UniProt:
A0A9E7ST34
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All DBs
Position
3291824..3293758
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AA seq
644 aa
AA seq
DB search
MATTETDADAEAGAHVTRLFGGPGSGKTTALLDHVEEILEADDVTFRDILVVSYTRAAAQ
EIRERLAERLDESPRALQGNVCTMHAKAYNLLDLSRGDVIGEKDKEEFCEDYGLEYEDEY
SGAGRRTARSTTIGNKIIATSQWLQRTRRDVADWYDVPFQWDVEEVRLPPEIDPNAQEGN
KYTPTWPSDDDRIDVPEAIRAWRNYKGQEGKIGFADMLERVKQRSLIPNVDYLIIDEFQD
ITTLQYDVYEEWKPHVKRVLIAGDDDQVVYSWQGADPALLLDEEVDEDIILPNSYRLPSN
VLNAVNQEIRHIDVRQDKDLNPRKEGGLVEAYQNRSMLDLVRMVRQTLVEDDGTIMLLFR
ARYQMFQFIDEFITEGIPFTALTDQRMWTDRLTQYVRAIEAIDADEDVTGLQARRLADML
MDSAFGTNERDALFDEIDERQEESGIDDLEELMIPVDVIKDYAPFLPGPASASDMVRKVT
NFQKKSIKAYFAIGTYEGMATDQVRVGTIHSAKGREADHVFVGTDLTEKVVEQMVATVDD
PEDIPGVEEFTKTSSPVPVLTDNERRVFYVGMSRARERLVLLENLVDGAPTLSIDVLLNN
RQTGADLEELVEQAQLPEAERLDGEGDVDADANVDADEAEVEAP
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggctacaacggagacggacgcggatgctgaggcgggggcgcacgtcactcgtctgttc
ggcggccccggcagcgggaaaacgacggcactcctcgatcacgtcgaagagatcctcgag
gcagacgacgtgacatttcgtgacatcctcgtcgtctcctacacgcgagcggccgcccag
gaaattcgagaacggctggccgagcgcctcgacgagagcccacgcgccctccagggcaac
gtctgtacgatgcacgccaaggcgtacaacctgctcgacctctctcgcggcgacgtcatc
ggcgagaaggacaaagaggaattctgtgaggactacggcctcgagtacgaggacgaatac
agcggcgcaggacgacgtaccgcgcggtcgacgaccattgggaacaagatcatcgcgacg
agtcagtggctccagcgcacccgccgggacgtcgccgactggtacgacgtacccttccag
tgggacgtcgaggaagttcgactcccgcccgaaatcgacccgaacgcccaggaggggaac
aagtacacgccgacgtggccctccgacgacgaccggatcgacgtccccgaggcgatccgc
gcctggcgcaactacaagggacaggaaggcaagattggcttcgcggacatgcttgagcgg
gtaaaacagcgctcactcatcccgaacgtcgactacctgatcatcgacgagttccaggac
atcacgaccctgcagtacgacgtctacgaggagtggaaaccccacgtcaagcgcgtcctg
atcgccggcgacgacgaccaggtcgtctactcctggcagggggccgaccccgcactcttg
ctcgacgaggaggtcgacgaggacatcatcctgccgaactcctaccgactgccgtcgaac
gtcctcaacgcggtcaatcaggagattcgccacatcgacgttcgccaggacaaggacctc
aacccgcgcaaggagggcggcctcgtcgaggcctaccagaaccgatcgatgctcgacctg
gttcggatggtccgccagaccctggtcgaggatgacgggacgatcatgctgctcttccgg
gcgcggtaccagatgttccagttcatcgatgagttcatcaccgaggggattcccttcacc
gcgctgaccgaccagcggatgtggaccgatcgactcacccagtacgtccgcgcaatcgag
gccatcgacgcggacgaagacgttaccggcctacaagctcgacggctggccgacatgctc
atggactcggcgttcggcaccaacgagcgcgacgccctcttcgacgagatcgacgagcgt
caggaagagtcgggcatcgacgacctcgaggaactcatgatcccggtcgacgtgatcaaa
gactacgcgccgttcctccccggtccggcctcggcctcggacatggtccgtaaggtgact
aacttccagaagaagtcgatcaaggcctacttcgctatcggcacctacgagggaatggcc
accgatcaggttcgcgtcggtacgatccactccgcgaaggggcgcgaggccgatcacgtc
ttcgttggcaccgacctcaccgagaaagtagtcgagcagatggtcgccacggtcgacgac
cccgaggacatccctggcgtcgaagagttcaccaagaccagttcgcccgtgcccgtcctg
acggacaacgagcgccgcgtcttctacgtcggcatgtcccgcgcccgggaacgcctcgtc
ctcctcgagaacctcgtcgacggcgcaccgacgctctcgatcgacgtcctgctcaacaat
cgccagaccggcgccgacctcgaggaactcgtcgagcaggcccagctacccgaggcggag
cgactcgacggcgagggtgacgtcgacgccgatgccaacgtcgacgccgacgaagccgaa
gtcgaagcgccgtga
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