KEGG   Staphylococcus aureus subsp. aureus USA300_TCH1516 (CA-MRSA): USA300HOU_1393
Entry
USA300HOU_1393    CDS       T00629                                 
Symbol
dnaQ
Name
(GenBank) DNA-directed DNA polymerase III epsilon subunit
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
sax  Staphylococcus aureus subsp. aureus USA300_TCH1516 (CA-MRSA)
Brite
KEGG Orthology (KO) [BR:sax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sax03400]
    USA300HOU_1393 (dnaQ)
Enzymes [BR:sax01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     USA300HOU_1393 (dnaQ)
DNA repair and recombination proteins [BR:sax03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    USA300HOU_1393 (dnaQ)
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD DEDDh_C Helicase_C Rv2179c-like RNase_H_2 DUF5900 HsbA
Other DBs
NCBI-ProteinID: ABX29403
LinkDB
Position
complement(1525249..1527942)
AA seq 897 aa
MGMATYAVVDLETTGNQLDFDDIIQIGITFVRNNQIIDTYHSMIRTNLEIPPFIQALTSI
EENMLQQAPYFNQVAQEIYDKIKDCIFVAHNVDFDLNFIKKAFKDCNIQYRPKKVIDTLE
IFKIAFPTDKSYQLSELAEAHGITLANAHRADEDAATTAKLMILAFEKFEKLPLDTLKQL
YYLSKQLKYDLYDIFFEMVRQYDAKPLDKSYEKFEQIIYRKQVDFKKPTTNYNGSLKSLY
SKAVDQLGLTYRPQQLYLAETILDQLMHSEKAMIEASLGSGKSLAYLLAALMYNIETGKH
VMISTNTKLLQSQLLEKDIPAMNEALNFKINALLIKSKSDYISLGLISQILKDDTSNYEV
NILKMQLLIWITETPSGDIQELNLKGGQKMYFDQKIETYVPARHDVHYYNFIKRNAQNIQ
IGITNHAHLIHSDVENSIYQLFDDCIVDEAHRLPDYALNQVTNELSYADIKYQLGLIGKN
ENEKLLKAIDQLEKQRILEKLDIAPIDIFGLKASMNEIHELNEQLFSTIFTIINDSDVYD
DDIHRFHNVFTFETKDILKDLHAIIDKLNKTLEIFNGISHKTVKSLRKQLLYLKDKFKNI
EQSLKAGHTSFISIKNLSQKSTIRLYVKDYAVKDVLTKQVLEKFKSLIFISGTLKFNHSF
EAFKQLFNKDVHFNTFEVNTSLQSAKNTSVFIPSDVASYQYKNIDEYVASIVSYIIEYTT
ITSSKCLVLFTSYKMMHMVQDMLNELPEFEDYVVLTQQQNQNYKIVQQFNNFDKAILLGT
STFFEGFDFQANGIKCVMIAKLPFMNKHNAKYWLMDSEFTSTFKEYVLPDAVTRFRQGLG
RLIRNENDRGIIVSFDDRLINSNYKNFFEQTLENYRQKKGDIQQFGKLLRQIQKKKK
NT seq 2694 nt   +upstreamnt  +downstreamnt
atgggtatggcaacctatgccgttgtggatttggaaacaacaggcaaccaattagatttt
gacgatatcattcaaattggtataacgtttgtgcgcaataaccaaattattgatacatat
cattctatgattagaacaaatttagagattccgccgttcattcaagcgttaacatccatt
gaagaaaatatgctacaacaagcgccatattttaatcaagttgcacaagaaatctacgat
aagataaaagattgcatttttgtagctcataatgtagattttgatttgaattttattaaa
aaggcatttaaagattgtaatattcaatatcgtcccaaaaaagttatagatacactagaa
atctttaaaatagcttttcctacagataaaagctatcaattaagtgaattagcagaggca
catggtattaccttagcaaatgcccatcgagctgacgaagatgccgctactactgctaaa
ttgatgatattagcttttgaaaaatttgaaaagttaccgttagatactttgaagcaatta
tattatttaagtaaacagttgaaatacgatttgtatgatattttctttgagatggttagg
caatatgatgcaaagccattggataaatcgtacgaaaagttcgaacagattatctatcgt
aagcaagttgattttaaaaagccgacaacaaattataatggcagcttgaagtctttatat
agcaaagctgtagatcaacttggcttaacatatcgaccgcaacaattatatttagcggaa
actatattagatcagctcatgcatagtgaaaaagcaatgattgaagcatcactaggcagt
ggtaaatcattagcatatttacttgcggccttgatgtataatattgaaactgggaagcat
gtcatgatttctaccaatactaaattactgcaaagtcaattgttagaaaaagatattcca
gcaatgaatgaagcgttgaattttaaaattaatgcactattgattaaaagtaaaagtgat
tacatttcattggggcttattagtcaaattttaaaagatgacacaagtaattacgaagtg
aatatcttgaaaatgcaattgctgatttggattacagagacgccgtccggagatatacag
gaattaaatttaaaaggtggtcaaaagatgtattttgaccagaaaattgaaacatatgta
ccggcacgtcacgatgttcattattataattttattaagcgaaatgcacagaacattcaa
attggtattacaaatcatgcacatttaattcattctgatgttgaaaattcaatatatcaa
ttgtttgatgattgtatagtggatgaagcacatcgcttaccagactatgccttaaatcaa
gtgacaaatgagttgagttatgctgatattaaatatcagcttggtttgattggtaaaaac
gaaaatgaaaaattgttaaaggcaattgatcaactggaaaagcagcgaattttggaaaaa
ttagatattgcaccaattgatatttttggcttgaaggctagtatgaatgagattcatgag
ttaaatgagcaattgttctcaacgatatttacgattatcaatgattctgatgtttatgat
gatgatattcatcgcttccataatgtatttacttttgaaacaaaagacattttgaaggat
ttacatgcgattatcgataagttaaataaaacgctagaaatattcaatggcattagtcat
aaaacagttaaatcattacggaaacagttgttgtatttaaaagataaatttaaaaatatc
gaacaaagtttaaaagctggacatactagtttcatttcgattaaaaatttatctcaaaaa
tcaacaatacgtttatatgtgaaagattacgctgtaaaagatgtattaacgaaacaagta
ttggaaaaatttaaatcgctcatttttatatctggtactttaaaatttaatcattcgttt
gaagcttttaaacagttattcaacaaagatgttcactttaatacatttgaagttaacacg
tcgttacaaagtgcaaaaaatacaagtgtatttataccgagtgatgtagcatcttatcaa
tataaaaatatagatgagtatgtagcatcgattgtaagctatattattgaatatacgact
ataacgtcatcaaaatgtttagtcttatttacgagttataaaatgatgcatatggtacaa
gatatgctaaatgaattgccagaatttgaagattatgttgtattaacacaacagcagaac
caaaattataaaatagtacaacagtttaataattttgataaggccatactgcttggtacg
tcaacattttttgaaggttttgattttcaagcaaatggtattaaatgtgtgatgatagcg
aagttaccgtttatgaacaagcataatgcaaaatattggcttatggattctgaattcact
tcaactttcaaggaatatgtattacctgatgcagttacacgttttagacaaggacttgga
agattaattagaaatgaaaatgatcgcggcataatagtttcatttgatgatcgactcata
aacagtaattataaaaacttttttgaacaaacacttgaaaattatcgtcagaaaaaaggc
gacattcaacagtttggaaaattattaagacaaattcaaaaaaagaaaaagtga

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