Sulfobacillus acidophilus TPY: TPY_0774
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Entry
TPY_0774 CDS
T01576
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
say
Sulfobacillus acidophilus TPY
Pathway
say03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
say00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPY_0774 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
say03021
]
TPY_0774 (rho)
03019 Messenger RNA biogenesis [BR:
say03019
]
TPY_0774 (rho)
Transcription machinery [BR:
say03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
TPY_0774 (rho)
Messenger RNA biogenesis [BR:
say03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TPY_0774 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
AAA_22
AAA_28
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AEJ38969
LinkDB
All DBs
Position
722999..725092
Genome browser
AA seq
697 aa
AA seq
DB search
MADEQKVGEATEPPRKRTRRTRKAATAETQEVPAADAAGTDGIIVENHPEEKPKRRGGRR
KKTDDIAITTPPATTADETVVSEPVLPVSPVSSEEPEKPKRRRRRTKAEAPETPAGEEPQ
AVSAAQPETAKAEPEPLPEPPAVMVDVASPMPYPVTETAGLPAKTAEASAAQTSVAVLAK
ESETPLEPKESETAKELSQATPATVEATSEAPAEPEAPAQPEISGVPAPIDVTEARESRG
AGPTNNGNWRRQPDRRPPQENGYRGNNPNPRRDIRSREPQLTMAQLEAMTLLDLYKLARQ
LNVENFRQYRKGELIWEILRARTQKDGFIFVQGLLDVVGDYGFLRPMDFQRSREDVYVSA
SQIRRFDLRPGDLVSGQARPPKDGERYFALLRVEAVNSLSPEKSAERPDFDALTPIFPDS
RFRLETTREDLACRLVDIVAPIGRGQRGLIVAPPKAGKTVLLKKLANAIAQNSPETHLMV
LLIDERPEEVTDMERSVRAEVASSTFDEPPEDHIRVAEMVLERAKRLVEMGKDVVIFLDS
ITRLARAYNLTIPPSGRTLSGGMDPAALHKPKRFFGAARKVENGGSLTILATALVDTGSR
MDDVIYEEFKGTGNMELHLDRKLAERRTFPAVDIKRSGTRREELLLTPEELDVIWAVRKA
IHNLQNPEATELLLQNLKRTKSNAEFFQRFLASQSNG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgaacaaaaagtgggcgaagcgactgaaccgccgcgcaagcgcacgcgacgc
acacgaaaagcggcaactgccgagacccaggaggtgcccgccgcggatgcggcggggacc
gacgggatcatagtcgagaaccatccggaagaaaaacccaaacgtcggggaggtcgacgg
aaaaaaaccgacgacatcgctataaccacccccccggctaccacggctgacgagacggtt
gtcagcgaacccgtcctacccgtgtctcccgtatcctcggaggaacctgaaaaaccgaaa
cgccgacgccgacggacaaaggccgaagccccggaaaccccggctggagaggaaccgcaa
gccgttagcgcggcgcaacccgaaacggctaaggccgaacctgaacctctccccgaacct
ccggctgttatggtcgacgtcgcgtcgccgatgccctacccggtgacggagacggccggt
ttgccggccaaaaccgctgaagcgtcggcggcccaaacgtcggtagcggtgttggcgaaa
gaatcggaaaccccacttgaaccgaaagagtcggagacggccaaggaactctcccaagcg
acaccggccacggttgaggcgacgtcggaggctccggccgaacccgaggccccggcgcaa
ccggaaatatcaggcgtaccggctccgattgacgtgacagaagcgcgcgaatcacgcggt
gccggccccacgaataacggcaactggcgccgtcagccggaccgtcgtccgccgcaagaa
aacgggtatcggggaaataatccgaatccgcgacgcgacattcggtcgcgtgaaccccag
ctgaccatggcccagctggaagccatgacccttttagatctctataagttagcccgccag
cttaacgtggaaaatttccgccaatatcgtaaaggtgaactgatttgggagattctgcgg
gccagaacccaaaaagacgggtttatctttgttcagggattattagatgtcgtgggcgat
tatggttttcttcgccccatggatttccaacggagtcgggaagacgtttatgtatcggcg
tctcaaattcgacgatttgatttgcgaccgggcgatctggtttcgggtcaagcgcggcca
cctaaggatggcgaacgctatttcgcccttttgcgggtggaagcggtcaacagcctctcg
ccggaaaagtctgccgagcgccccgattttgatgccctcacgcccatctttcccgattcg
cgttttcgccttgaaacgacccgtgaagacttagcgtgccggctggtggatattgtggcc
ccgattggccgaggtcagcggggattgattgtggcccctcctaaggccgggaaaaccgtc
ttattaaagaaattagccaacgcaatcgcgcaaaacagtccggaaacccatttgatggtc
ctcttgatcgacgaacggccggaagaagtgaccgacatggagcggtcagtacgggctgaa
gtcgccagctccacgtttgacgagccgccggaagatcatatccgggtggcggagatggtg
ttggaacgcgccaaacggctggtggaaatggggaaagatgtggtcatctttttggattcc
atcacccggctggcccgggcttacaatttaaccattccgccctcgggacgaactttatcc
ggtgggatggatcccgctgctctgcacaagccgaagcgctttttcggagccgcccgtaaa
gtggaaaacggtggcagcttgacgattttagccacggcgctggtggatacgggatcacga
atggacgacgtgatttacgaagagtttaaaggtaccggtaacatggaactccacttggat
cgaaagttggccgagcggcggacatttccggcggtggatattaagcgatcgggaacccga
cgggaagagttattgcttacgcccgaagaattggacgtcatttgggcagtgcgaaaagcc
attcacaatttgcaaaatcccgaagccacggagcttttactgcaaaatctcaaacgaacc
aaatccaatgcggagttttttcagcggtttttggctagccaaagcaacgggtag
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