Sulfobacillus acidophilus TPY: TPY_0982
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Entry
TPY_0982 CDS
T01576
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
say
Sulfobacillus acidophilus TPY
Pathway
say03420
Nucleotide excision repair
say03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
say00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TPY_0982 (uvrD)
03430 Mismatch repair
TPY_0982 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
say03400
]
TPY_0982 (uvrD)
Enzymes [BR:
say01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPY_0982 (uvrD)
DNA repair and recombination proteins [BR:
say03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TPY_0982 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
TPY_0982 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEJ39172
LinkDB
All DBs
Position
919446..921575
Genome browser
AA seq
709 aa
AA seq
DB search
MSLLDALNGPQREACSTVDGPLLVLAGAGSGKTRTLTYRIAYLIQETGVFPSQILAFTFT
NKAAREMKTRIDALVGPDSRFMWVGTFHAVAVRILRENIHRLGYDNQFVVYDTDDTKALM
KDIVRELNWDEKEWPAGLLLNAISRAKNKFQGPGQLEDTSYFGRRVDDAYRLYQTRLKNL
NAVDFDDLIFLTVKLFDEFPEVQQHYRQRFRHVLVDEYQDTNLAQYRLVRHLVGPEGNIC
AVGDDDQAIYGWRGADMRNILEFQRDFPGAKIIRLEENYRSTAVILNAANAVVANNQERL
GKQLWTQKGEGQKIRVYRAPDEESEAWYAAEVLHEAVRRGRKLSECAILFRTNAQSRAFE
MAMARAGITYRLVGGKRFFERKEVKDVLAYLRVVFNPQDDMSLLRIINFPRRGLGDVAQR
RLREFAQAEGISLVEALARAQEIGDLSAQARRAASELADLIENWRQGLRQLGLADQVRRV
AEESGMMNALRAEKTREAEDRLENIGELMSEAKRFEDEQTTSDLGEFLGWIALVSDWDET
NEDGGGVWLMTVHSAKGLEFPLVILAGLEEGVFPHSRSLEEGTVEEERRLMYVGITRAME
ELFLTYAETRTMLGRTAANPVSRFLKEIPEEYIASAKRLAAPDRAVGQRTSVSNLTLGER
VRHPRFGWGTIVAVRGEGENTEVTIAFPGGGVRSFLAKFAQLTREELEA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttagatgccttaaatggtccccaacgtgaggcctgttcgaccgtcgatggc
cctttgctggtactggcgggggccggtagcggaaaaacgcggactctcacctatcgcatt
gcctaccttattcaagaaacgggtgtttttccgtcccaaatactagcgtttacgttcacc
aacaaagcggcccgggaaatgaaaacccggattgatgcgttagtgggtccggatagccgt
ttcatgtgggtcggaacgtttcatgcggtggcggtgcgcatattacgcgaaaacatccat
cggttaggctacgacaaccagtttgtggtgtatgacaccgatgacaccaaagccttgatg
aaagacatcgtccgagaattaaattgggacgaaaaggaatggcccgccggccttttgtta
aatgcgatcagccgggccaaaaacaagtttcaaggtccgggccagttggaagacaccagc
tatttcgggcgccgggtggatgatgcctatcgtttatatcagacccggttaaaaaacctc
aatgcggtcgatttcgacgacctcatttttttgacggtcaaattgtttgacgaatttccg
gaagttcaacagcattaccggcaacggttccgccatgtcctggtcgacgaatatcaggac
accaatctggcgcaatatcgcttggtccggcacttggtggggccggagggcaatatttgt
gcggtcggcgatgacgaccaagcgatttatggttggcggggcgccgatatgcgcaacatt
ttagagtttcaacgagattttccgggtgcgaaaattatccgcctggaggagaactaccgg
tccacggccgtgattttaaatgcggcgaacgccgttgtggcgaataaccaggagcggctc
ggcaaacagttatggacgcaaaaaggggaaggccaaaaaattcgcgtctatcgcgcgccg
gatgaggaaagcgaagcctggtacgccgcggaagtcttgcacgaagcggtgcggcgcggg
cgcaaattatcggaatgcgcgattttgttccggaccaacgcgcaatcgcgggcctttgaa
atggcgatggcccgggctggaataacctaccgcttagtggggggtaagcgctttttcgaa
cggaaagaggttaaagatgtcttagcctacttgcgggtcgtatttaatccgcaagacgat
atgtctcttttacgcattattaattttccccggcggggactcggcgatgtggcccagcgt
cggctacgggagtttgcccaggcggaaggcatctcgttggtcgaagcgttggcgcgggcg
caagaaattggtgatttgtcggcccaggcccggcgggcggcctccgaactggccgatttg
attgagaactggcgccaagggttgaggcaactcgggttggccgaccaggtgcgtcgcgtg
gcggaagagagcgggatgatgaatgcgctgcgggcggaaaaaacccgggaggcggaggat
cggctggaaaatatcggggagttgatgtcggaagccaaacggttcgaggacgaacaaacc
acgtccgatttaggtgagtttctcggttggattgcattggtatccgactgggacgaaacc
aatgaagatggtggcggcgtttggttgatgacggtacacagcgcgaaagggctggaattc
ccgttggtgattttggccgggttagaagaaggcgtctttccccatagtcggtcgctggaa
gagggaacggtcgaggaagagcggcggctcatgtatgtcgggattacccgggccatggaa
gaactgtttttaacctatgccgagacccgtaccatgcttgggcgcacggccgcgaatccg
gtgtcacgttttctcaaggaaattcccgaggagtatatcgcttcggccaagcggctggcg
gcgcccgatcgggcggtcggacaaaggacgtcggtcagtaatttgaccttaggtgaacgg
gtccgtcatccccggtttggctggggcaccatcgtggcggtccgcggtgaaggggagaat
acggaagtgacgatcgcgtttccgggtggtggggtgcgatcgtttctagccaaatttgcc
caactgacccgagaggagctggaagcgtga
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