Sulfobacillus acidophilus TPY: TPY_1570
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Entry
TPY_1570 CDS
T01576
Name
(GenBank) Ku domain protein
KO
K10979
DNA end-binding protein Ku
Organism
say
Sulfobacillus acidophilus TPY
Pathway
say03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
say00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TPY_1570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
say03400
]
TPY_1570
DNA repair and recombination proteins [BR:
say03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
TPY_1570
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AEJ39752
LinkDB
All DBs
Position
complement(1478807..1479568)
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AA seq
253 aa
AA seq
DB search
MIGFGLVAIPIQVYKAMESDHIDIHWLHRVCHNRIRYQKYCPVCDVVVEPDDLVKGVELP
DGRTVVLPPDENPEPEADERSITILAFPRLADVDPVYYETAYWLKPAPGGTKPYALLVEA
LRQEERVALAEMRLRARRSLAVVRAYNERTLMLHRMYYPEHLRAEGQEFGPTAVELSEKE
RQLARTLIQVMAEPFRPERYPNEERARKLALIESLTPAAVKPSGVVANNQDVIDLMERLK
ASVSQIQAEREVQ
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgggtttggactggtcgcgatacccatccaagtttataaggcgatggaatccgac
catatcgacatccattggctccatcgcgtatgccataaccggattcgctatcagaaatat
tgcccggtgtgcgacgtcgtggtggaaccggatgatttggtcaaaggggtggaactaccg
gacggccgaacagtggtgctaccaccggacgaaaacccggaaccggaagcggatgaacgg
agcattacgattttggcctttccccgcctggctgatgtcgatcccgtctactatgaaacc
gcctattggttaaaacccgccccggggggcaccaaaccttatgcactcttggtcgaggcg
ttacggcaagaagaacgggtggctctggcggagatgcggctccgagcccggcgatccctg
gcggtggtgcgagcttataatgagcgaaccttaatgctccaccggatgtattatccggaa
cacctccgggcggaaggacaagagtttgggccgaccgccgtggagctgtcggagaaagaa
cggcaattggctcgtacgttaatccaagtcatggcggaaccctttcgtccggaacgctat
ccaaatgaggagcgggctcgaaaacttgcgctcattgaatccttaaccccggcggcggtg
aagccgagcggagtggtagccaataaccaggacgtcattgatttgatggaacgcctcaaa
gcatcggtcagccaaattcaagccgagcgggaggttcaatag
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