Sulfobacillus acidophilus TPY: TPY_1706
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Entry
TPY_1706 CDS
T01576
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
say
Sulfobacillus acidophilus TPY
Pathway
say03030
DNA replication
say03430
Mismatch repair
say03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
say00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPY_1706 (polC)
03430 Mismatch repair
TPY_1706 (polC)
03440 Homologous recombination
TPY_1706 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
say03032
]
TPY_1706 (polC)
03400 DNA repair and recombination proteins [BR:
say03400
]
TPY_1706 (polC)
Enzymes [BR:
say01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPY_1706 (polC)
DNA replication proteins [BR:
say03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TPY_1706 (polC)
DNA repair and recombination proteins [BR:
say03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TPY_1706 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
HHH_3
DUF655
T2SSK
tRNA_anti-codon
RNase_H_2
HTH_63
Motif
Other DBs
NCBI-ProteinID:
AEJ39887
LinkDB
All DBs
Position
complement(1604111..1608250)
Genome browser
AA seq
1379 aa
AA seq
DB search
MPVRFHQWMRERGWLDCDIPVVLVKREATGIHVWLERPVPPPYAPWLQELSQVLARQWQT
PVVFDVPHESAEHLADKLIRLFQTSGGSFVTLLDTDAVTDIPGGLRIRFPNRVAWDLFEK
WGGTARVQRALGRELHLETAIAELPPPPPTPVVAAPIAVSPEPVQSIGSGIPAGEPLRLS
QLPMTGDVIVTGRVLSREVRQSQLGLKHATWTITDDTGAVRLKWSERRGGPKLPEDLWPV
GRWVKVAGTRDVDKFTEERVIVVKSGGLVDPPLPEKGEPRIEFHAHTKMSAMDGLVSPKE
LFQQAALLGMKALAVVDHGVVQTYPELEGLEKSTGVRPVYGIEINLVDTEVVPLTGDAPD
FPRIPLVVVDVETTGLSPWAHEVIELGAVRVEEGRITDTFHRLIRPTRSVSVATTRITGI
KAEELAEGVRPEEAWGAFFQWAEGAVLAAHNARFDMGFLRRAYQTYIRPDGPTTFPFAIL
DTLALARALVPGLKSYGLGPLTDYFRIPLSQHHRALADAEATGHLTIRLLTQLMEDVPHF
QSGQALAVGYQVGRPIPAVVLVKSQPGIEALYRLVSESHLQYFHRVPRIPRNRLTAVREH
LLIGSPFHGGEIAEALFRNADDHEREELGRFYDYWEVVAPGSAQTLMSEENLDGLDGVRH
FIEQIIEWGQKAHKPVLAVSDVHYLRSSDSIYREILAQTAKGELHNRLDTLYLRTTEELL
DEFAWLGPEIGRQLVIEEPEALLARIEPVKPVPSGLFSPKLPEAEEVVSQMPYIRARELY
GDPLPDIVQKRLDKEVHAIVSNGFASIYYIAHRLVQKSLDDGYLVGSRGSVGSSLVATLL
RITEVNPLPPHYRCPRCRYTDFEAGESYGSGYDLPPKLCPHCQTPLIGDGQDIPFETFLG
FEGDKVPDIDLNFSGDYQPVIHRYTEELFGQGHVFRAGTIATVAEKTAFGLVKAWARENG
RELTPAEIEWLASGITGVKRTTGQHPGGLMVVPADEDIHHFCPVQHPADDRTSDVITTHF
DYHAIEGRLLKLDLLGHDDPTVIRMLQDLTGIAPQDIPFQDDKVMSLFREVSALGISAEE
IATPVGSLGIPEFGTRFVRNMLVDTRPKTFAELIRISGLSHGTEVWTNNAQDLIRQQLAN
LSEVIATRDDIMLYLIQRGLEPKVAFGISESVRKGKGLKPDQIEVMKAHGVPDWYIESCG
KISYLFPKAHAAAYVMMGWRIAWFKVYHPLAYYATYFSVRASDFAPDIVLGGIKAVNRAL
ADIESKGNDASPKEKSLVIVLEVAREMLARGFHFYPIDLERSHATRFLLETDGLLMPFAA
LPGLGQNAAQHIIEARQEKPFLSIDDLRQRARLTKSVIDLLRQHGALDGLGETSQLGFF
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
gtgccggtccgttttcatcaatggatgcgagagcgaggctggctagactgtgacattccg
gtcgtcctggtcaaacgggaagccaccggaattcacgtatggctcgaacgacctgtccca
cccccatacgcaccgtggcttcaggaattaagtcaagtcttagcccgccaatggcagacc
cccgtcgttttcgacgtgccgcacgagtcggctgagcacttagcggacaagctcatccga
ctctttcagacgtcggggggcagttttgtcacgctgttggacaccgatgccgtgacggac
attcccggcggactgcgtattcggtttccgaaccgggtagcctgggatttgttcgaaaag
tggggggggacggcccgtgtccagcgggccctcggccgcgaattgcatctggaaaccgcc
attgccgaattgcccccgccaccgccgaccccggtggtggcggccccgatcgccgtcagc
ccggagcctgtgcaatcgatagggtccggcatacccgccggagaacccctccgattatcg
cagttgccgatgaccggcgacgtcattgtaaccggccgcgtcttgtcccgtgaggtccgc
caaagccaattgggccttaagcatgcgacctggacaatcaccgacgacaccggtgccgtg
cgtctaaagtggagtgaacgccgtggaggtccgaagctgccggaggatttatggccggtc
ggacgctgggttaaggtagccggcacgcgggacgtcgataagtttaccgaagagcgggta
atcgttgtcaaatccggtgggctggtcgaccccccgttaccggaaaaaggggaacctcgg
attgaatttcatgcgcacacgaaaatgagcgccatggatggattggtcagccccaaagag
ctctttcaacaggccgccctactcggcatgaaggcgttggcggtcgtggatcacggagtc
gtgcaaacctatccggagctggaaggtctcgaaaagagtaccggagtgcgaccggtttac
ggcatcgaaataaacctggtcgataccgaagtcgtccccttgacgggggacgcgccggac
tttccccgcatcccgctagtggtggtcgacgtggagaccaccggtctctcgccgtgggcg
cacgaagtgatcgagttaggggcggtgcgagtcgaagagggacgcataacggataccttt
caccgcctgattcggcccactcggagcgtatcggtggcgaccacgcggattaccgggatc
aaggccgaagaattggctgaaggggtccgccccgaagaagcctggggcgcgttcttccaa
tgggcggagggggcggttttggccgcccataatgcacgctttgatatgggatttttgcgg
cgcgcctaccagacctatatccgcccggacggcccgacgacctttccgtttgccatcctg
gacactttggcgttagcccgggctctagtgccggggctcaaaagctatggtttggggccc
ctaaccgattatttccggattcccttgtcccaacatcaccgggccttagccgatgccgaa
gcaaccgggcacttaacgatccgcctgttgacccagctcatggaagacgtgccccatttt
caatccggtcaagcgctggcggtcggctatcaagtgggccgtcctattccggcggtcgtg
ttagtcaagtcgcaaccgggcatcgaagccctgtaccgactggtctccgaatcccaccta
cagtattttcatcgcgtgccgcgaattccccgaaaccgtctgaccgcggtgcgggaacat
ttattgattggaagcccctttcacggcggggaaatcgccgaggctttatttcgcaatgcc
gacgaccacgaacgagaggaattgggacgtttctacgactattgggaagtggtcgctccc
ggtagcgcgcagaccttgatgagcgaagaaaatttagacggcttagacggtgtacggcac
ttcatcgaacagatcatcgagtggggtcaaaaagcccacaaaccggttttggcggtatcg
gacgtccattatttgcgctcgtccgacagtatctaccgagaaattttagcccaaaccgct
aagggcgaattacataatcggctggatacgctgtatctccgcaccacggaagagctctta
gacgagtttgcctggcttggacccgagatcggtcggcaactggtgatcgaagagcccgag
gccctattggcccgtattgaaccggttaagccggttccgagcggccttttctcgcctaaa
ttacccgaggcggaagaagtggtgtcgcaaatgccctatatccgagcccgcgagctttat
ggcgatccgttgcccgacatcgtccaaaaacggctcgataaggaagtgcacgccatcgtc
agtaacggatttgccagtatctactacattgcccatcgattggtgcaaaaatcgctggac
gacggatacctggtcggctcgcgaggttcggtaggttcgtcgttggtcgccaccctgtta
cgcattacggaggtcaatcccttaccgccgcattatcgctgtccccgttgccggtatacc
gattttgaggcgggggagagctatggatcgggttatgatctgccgccgaagctttgcccg
cattgtcagaccccccttattggggacggacaggacattcccttcgagacgttcttaggg
tttgaaggggataaggtaccggatatcgacctcaatttttccggtgactaccaacctgtg
attcaccgctatacggaagaattgtttggccaaggacatgtttttcgggccggaaccatc
gccacggtggccgaaaaaaccgctttcggattggttaaggcctgggcgcgggagaacggc
cgcgagttgactccggccgaaatcgaatggctggcctcgggcattaccggcgttaaacgc
accacaggccaacacccgggcggcctgatggtcgtaccggccgatgaagatattcatcat
ttctgtcctgtccaacatccggccgatgatcggacctcggatgtcatcaccacgcatttc
gattaccacgccattgaagggcggctcttgaagctcgatttactgggacacgatgatccg
acggtcattcgcatgctacaagatttaaccgggatcgcgccgcaagacattccctttcag
gacgacaaagtgatgagcctctttcgggaggtttcggcgttggggattagcgccgaagag
attgccacaccggtcggtagcttaggcataccggagttcggcacccgatttgtccgaaac
atgttagtcgacacgcggccgaagacatttgccgaactcatccggatttccggcttgtcg
cacggcacggaagtgtggacgaataatgcccaagatttaatccggcaacaactcgccaat
ttgtcggaggtgatcgccacccgcgacgacatcatgttgtatttgattcagcgtggtctc
gaacccaaagtggcatttggcatatcggagtcggttcgtaaaggcaaagggttaaagccg
gaccaaattgaggtgatgaaagctcacggggtacccgattggtatatcgagtcttgtggg
aaaatcagctatctgtttcccaaggcccatgccgccgcgtatgtcatgatgggttggcga
atcgcctggtttaaggtttatcatccgttggcctattacgccacctacttttcggtacgg
gcatcggattttgccccggacatcgttttgggaggtattaaggcggtcaaccgcgcgctc
gccgatattgaaagtaaagggaacgacgccagtccgaaagaaaaatcccttgttatcgtc
ctggaagtggcacgggaaatgctggcccggggatttcatttttatcccatcgatttggaa
cgttcccacgccacccgctttttgttggaaacggacggcttattaatgccgttcgcggcg
ctccccggtttaggccagaatgctgcacaacacattattgaggcccgacaagaaaagcct
tttctatcaattgacgacctccgccaacgcgcacgcctgaccaagagtgtcatcgaccta
ttacgacagcatggtgccctggacggattgggcgaaaccagtcagctcgggttcttctga
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