Entry |
|
Name |
(GenBank) DEAD/DEAH box helicase-like protein
|
KO |
|
Organism |
say Sulfobacillus acidophilus TPY
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:say00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TPY_2445
09124 Replication and repair
03420 Nucleotide excision repair
TPY_2445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:say03021]
TPY_2445
03400 DNA repair and recombination proteins [BR:say03400]
TPY_2445
Enzymes [BR:say01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPY_2445
Transcription machinery [BR:say03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TPY_2445
DNA repair and recombination proteins [BR:say03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TPY_2445
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
2270230..2271954
|
AA seq |
574 aa
MSRLPLIVQSDLTILLEVDNPLFEEARDALSGFAELIKSPEHIHTYQLSALSLWNALAAG
LTESQIQESLTRFSSYPVPDTVIQFIHDQVHRFGRIRLQVAPDGDGFWLTANDQTILTQL
GRMKSVIPYLGPHLPPGYRISPENRGLVKQALARAGWPVTDEAGYVTGAPLPLGWRSITL
NGRPFHLRTYQEAAIRVFWGDGEAQRGSGVIVLPCGAGKTVVGMGVMERAQTHTLILTTS
MAALHQWKRELLDKTTLTDDVIGEYSAAVKHIKPVTLTTYQMLTHRKHGDYVHFQELDRA
PWGLIIYDEVHLLPAPMFRLTASLQARRRLGLTATLIREDGHADDVFSLIGPKRFDMPWK
TLESEGWIATAHCREIRVGLEPGLRDRYASAEEPEQIRLAAENPAKIGVIRELLTHHAQD
HVLIIGQYLSQLERLAEELHAPLITGKTPARERERLYQAFRDGQLPVLMVSKVGNFAIDL
PDANVAIQISGAFGSRQEEAQRLGRILRPKSDGGEATFYTIVSEDTKEQLFAQKRQLFLA
EQGYRYEIAHAAPDGRPVDRLAPVIPFPRREARS |
NT seq |
1725 nt +upstreamnt +downstreamnt
gtgtctcgattaccgttaattgtacagagcgatctcaccattttgttggaagtggacaac
ccgctgttcgaggaggcccgggatgccttatccgggtttgccgagttgatcaaaagtcct
gaacacattcatacctaccaattgagcgccctctccctgtggaacgccttggccgccgga
ttgaccgaatcccaaattcaagagtcgttaacccgattttcctcctatcccgtccccgac
accgtcatccaatttatccacgatcaagtgcatcggtttggtcggattcgccttcaggtg
gcaccggacggagacggattttggctaacggccaacgaccagaccattctcacgcaattg
ggccgtatgaaatccgtcattccttacttagggccgcacttgccccccgggtaccggatt
tcgccggaaaaccgcggattggtcaagcaagctttagcccgggcgggttggccggtgacc
gacgaagcgggttacgtgaccggggcgcccttacccctgggctggcgctctattacgctc
aacggacggccgtttcacctccgcacctaccaagaggctgctatacgggttttctggggg
gacggcgaggcccaaagggggagcggcgttatcgtgttaccctgtggcgccggcaaaacg
gtggtcggcatgggggtcatggaacgcgcccaaacccacaccctgattctgacgacctcc
atggccgcccttcatcaatggaagcgggaactcttggataaaacgacgttaacggacgac
gtcatcggcgagtacagtgccgccgtcaagcacataaaacctgtgaccttaaccacctac
cagatgctgacccatcggaaacatggcgactatgtgcactttcaggaactcgatcgagcc
ccttggggccttatcatctatgacgaggtgcacctgttaccggcccccatgtttcgattg
acggccagcctgcaagcccgtcgccgtttagggctcaccgcgaccttaatccgtgaggac
ggccatgccgacgacgtcttctccttaatcggccccaagcgatttgatatgccctggaaa
actctggaatccgagggctggatcgcaaccgcccattgtcgagaaatccgcgtgggtcta
gagcccggtctacgtgaccgctacgcgagcgccgaagagcccgagcaaatccgcctggcc
gccgaaaacccggccaaaatcggcgtgatccgcgagcttttaacccatcatgcccaggat
catgtgctgattatcggacaatacctgagtcaattggaacgcttggcggaggagttgcat
gcccccttaattaccgggaaaaccccggctcgggagcgggaacgcctttatcaagcgttt
cgtgacggacagctgccggtcctcatggtttccaaagtcggtaacttcgcgattgattta
ccggacgccaatgtggcgattcaaatcagtggcgcatttggatctcggcaagaagaagcc
caacgactcggtcgcattctccgccccaaatcggacggcggtgaagcgacattttatacg
attgtctccgaagacaccaaggaacagctatttgcgcagaaacggcaattgtttttggcc
gaacaaggctaccgctatgaaatcgcgcatgccgcccccgacggtcgacccgtggaccgt
ctggctccggtcattccttttcctcgccgggaggcccgctcatga |