KEGG   Sulfobacillus acidophilus TPY: TPY_2445
Entry
TPY_2445          CDS       T01576                                 
Name
(GenBank) DEAD/DEAH box helicase-like protein
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
say  Sulfobacillus acidophilus TPY
Pathway
say03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:say00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    TPY_2445
  09124 Replication and repair
   03420 Nucleotide excision repair
    TPY_2445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:say03021]
    TPY_2445
   03400 DNA repair and recombination proteins [BR:say03400]
    TPY_2445
Enzymes [BR:say01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TPY_2445
Transcription machinery [BR:say03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     TPY_2445
DNA repair and recombination proteins [BR:say03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     TPY_2445
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom
Other DBs
NCBI-ProteinID: AEJ40605
LinkDB
Position
2270230..2271954
AA seq 574 aa
MSRLPLIVQSDLTILLEVDNPLFEEARDALSGFAELIKSPEHIHTYQLSALSLWNALAAG
LTESQIQESLTRFSSYPVPDTVIQFIHDQVHRFGRIRLQVAPDGDGFWLTANDQTILTQL
GRMKSVIPYLGPHLPPGYRISPENRGLVKQALARAGWPVTDEAGYVTGAPLPLGWRSITL
NGRPFHLRTYQEAAIRVFWGDGEAQRGSGVIVLPCGAGKTVVGMGVMERAQTHTLILTTS
MAALHQWKRELLDKTTLTDDVIGEYSAAVKHIKPVTLTTYQMLTHRKHGDYVHFQELDRA
PWGLIIYDEVHLLPAPMFRLTASLQARRRLGLTATLIREDGHADDVFSLIGPKRFDMPWK
TLESEGWIATAHCREIRVGLEPGLRDRYASAEEPEQIRLAAENPAKIGVIRELLTHHAQD
HVLIIGQYLSQLERLAEELHAPLITGKTPARERERLYQAFRDGQLPVLMVSKVGNFAIDL
PDANVAIQISGAFGSRQEEAQRLGRILRPKSDGGEATFYTIVSEDTKEQLFAQKRQLFLA
EQGYRYEIAHAAPDGRPVDRLAPVIPFPRREARS
NT seq 1725 nt   +upstreamnt  +downstreamnt
gtgtctcgattaccgttaattgtacagagcgatctcaccattttgttggaagtggacaac
ccgctgttcgaggaggcccgggatgccttatccgggtttgccgagttgatcaaaagtcct
gaacacattcatacctaccaattgagcgccctctccctgtggaacgccttggccgccgga
ttgaccgaatcccaaattcaagagtcgttaacccgattttcctcctatcccgtccccgac
accgtcatccaatttatccacgatcaagtgcatcggtttggtcggattcgccttcaggtg
gcaccggacggagacggattttggctaacggccaacgaccagaccattctcacgcaattg
ggccgtatgaaatccgtcattccttacttagggccgcacttgccccccgggtaccggatt
tcgccggaaaaccgcggattggtcaagcaagctttagcccgggcgggttggccggtgacc
gacgaagcgggttacgtgaccggggcgcccttacccctgggctggcgctctattacgctc
aacggacggccgtttcacctccgcacctaccaagaggctgctatacgggttttctggggg
gacggcgaggcccaaagggggagcggcgttatcgtgttaccctgtggcgccggcaaaacg
gtggtcggcatgggggtcatggaacgcgcccaaacccacaccctgattctgacgacctcc
atggccgcccttcatcaatggaagcgggaactcttggataaaacgacgttaacggacgac
gtcatcggcgagtacagtgccgccgtcaagcacataaaacctgtgaccttaaccacctac
cagatgctgacccatcggaaacatggcgactatgtgcactttcaggaactcgatcgagcc
ccttggggccttatcatctatgacgaggtgcacctgttaccggcccccatgtttcgattg
acggccagcctgcaagcccgtcgccgtttagggctcaccgcgaccttaatccgtgaggac
ggccatgccgacgacgtcttctccttaatcggccccaagcgatttgatatgccctggaaa
actctggaatccgagggctggatcgcaaccgcccattgtcgagaaatccgcgtgggtcta
gagcccggtctacgtgaccgctacgcgagcgccgaagagcccgagcaaatccgcctggcc
gccgaaaacccggccaaaatcggcgtgatccgcgagcttttaacccatcatgcccaggat
catgtgctgattatcggacaatacctgagtcaattggaacgcttggcggaggagttgcat
gcccccttaattaccgggaaaaccccggctcgggagcgggaacgcctttatcaagcgttt
cgtgacggacagctgccggtcctcatggtttccaaagtcggtaacttcgcgattgattta
ccggacgccaatgtggcgattcaaatcagtggcgcatttggatctcggcaagaagaagcc
caacgactcggtcgcattctccgccccaaatcggacggcggtgaagcgacattttatacg
attgtctccgaagacaccaaggaacagctatttgcgcagaaacggcaattgtttttggcc
gaacaaggctaccgctatgaaatcgcgcatgccgcccccgacggtcgacccgtggaccgt
ctggctccggtcattccttttcctcgccgggaggcccgctcatga

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