Sulfobacillus acidophilus TPY: TPY_3374
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Entry
TPY_3374 CDS
T01576
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
say
Sulfobacillus acidophilus TPY
Pathway
say03410
Base excision repair
say03430
Mismatch repair
say03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
say00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TPY_3374 (recJ)
03430 Mismatch repair
TPY_3374 (recJ)
03440 Homologous recombination
TPY_3374 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
say03400
]
TPY_3374 (recJ)
DNA repair and recombination proteins [BR:
say03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TPY_3374 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TPY_3374 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TPY_3374 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AEJ41526
LinkDB
All DBs
Position
complement(3115113..3117434)
Genome browser
AA seq
773 aa
AA seq
DB search
MTRLRNHWLWQTPVPPSAIQELAERLEVPPTVAEILWRRQIHTVEAYQALLTQDGPLSDP
RLLPDMAEAVAAISEAIERRRPIRVYGDYDADGVTATALLVRGLRALGGRVDYYIPNRFD
EGYGLNSDAVQIAHDEGVELLVTVDCGSSSPDAAQLADTLGLTLVITDHHGLPARLPQAR
ALVNPERRQPVDRLSGAGVALQVLRALSPVKEVDDWYYAVASIGTVADVVPLTGNNRRLV
ARGLKALQAGLVPGVSVLLAHQHRDVQACQVDDLGFFIGPRLNAAGRMGDAKGAVELLLA
ETAAEADPWAQQLAEANARRRAEEQTIVAEAWRQLPTRLDGRLYPFCVVAGDGWHHGVIG
IVASRLKDVVRRPVAVIGWDGGDGKGSARSVEGVHLLEHMRQASELFLALGGHRGAAGFS
LLRQPADVLSRRLSDGLSEAARVQPYIGVRYDARLEASELTEELAVRLKALEPFGHGFER
PVWLIQGVVADARTMGSDGLHLRLALRDTSMRMVGFQLGIYADGLEPGTPVQFLGQIEWN
WFRQRWVPQCRITEWLWPYPRKAVSYQSGLPSLAESAERRTIYVTESPREVREWARMLSA
WSFSPSEPVGQLAYWEQALLRGQYNRVVVSQWHFWPRLWGWADDVVWLTFPRSRRRFEES
AAWLSPAGQLWWSPDGQGNAPSVYRKWQRLLPTRERLARSWRHWVEGRQGLQIGRQVVKD
LGLSPDWTPRDGKVPLDRSFQYRWTQYEWNDARQWLTKEGNHDAMAAIRTRNT
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggcttcgaaaccattggctttggcaaacgccggttccaccgtcggccatccag
gaactggcggagaggctcgaggtgccgccgacggtcgcagaaattttatggcggcgtcaa
atccacacggtagaggcttaccaggccctcctgacccaggacgggcctctcagcgatccc
cggcttttgccggatatggcggaggccgtggccgcaatttcggaggccatcgagcgccgg
cgacccattcgcgtctatggcgattacgatgccgacggagtgaccgcgacggcgctcttg
gtgcgcggcctgcgggccctcggagggagagtggattattatattcccaaccgatttgac
gaagggtatggcttaaattccgacgcggtccagatcgcccacgatgagggggtggagctt
ctcgtcacggtcgattgcggatcgagttcgcccgatgcggcccaacttgccgataccctg
ggtttgacgcttgtgattacggatcatcatggattgcctgctcggctgccgcaggcgcgg
gccttggtgaatcctgaacgtcggcaaccggttgatcggctgtcgggagccggagtcgcc
ttacaggttttacgcgcgctgagtccggtcaaagaggttgacgattggtattatgccgtg
gcatcgattggcacggtggccgatgtggtgccgttaaccggcaataaccgacggttggtg
gcgcgcggcttgaaggcgttacaagcggggctggtcccgggggtttccgtgctgctggcc
catcaacaccgggatgttcaggcttgccaagtggacgatttgggtttttttatcggtccg
cggcttaatgcggcgggtcgcatgggagacgccaagggggccgtcgagctgttgctggcg
gagacggcggcggaggcggatccctgggcgcaacaattagccgaggccaacgcccgacgg
cgggcagaggagcaaacgattgtcgccgaagcgtggcgccaactgccgacccgactggat
ggccggctctatcccttttgtgtggtggctggagacggatggcatcatggggtcatcggg
attgtggcttcgcggcttaaagacgtggttcggcgacccgtggcggttatcgggtgggat
ggtggggacggtaagggatccgcccgttcggtggaaggtgtccatcttttggagcatatg
cgacaggcttccgaactgtttctggcgttagggggtcaccgcggggccgccgggtttagt
cttttgcggcagccggccgacgttttgagtcggcggctctcggacgggctatccgaggcg
gcgcgcgtccaaccctacattggggtgcggtatgatgcgcggctcgaggcatcggaactc
acggaagagttggccgtccggttgaaggcgttggagcccttcggacacggttttgagcga
ccggtctggttgattcagggcgtggtcgccgacgcgcgcaccatgggctcggacgggctt
cacttacgtttggcgcttcgggatacttcgatgcgtatggtgggatttcaactcgggatt
tatgccgacgggctcgaaccggggacgccggtacaatttttaggccaaatcgagtggaat
tggtttcggcaacgttgggtgccgcaatgtcggatcacggaatggttatggccctacccg
agaaaggcggtcagctatcaatccggcctgccctccctggccgaatcggctgaacgccgc
accatttatgttaccgaatcgccgcgcgaggttcgggagtgggcccggatgctttccgcc
tggtcgttttcgccgtctgagccggtcggtcaactggcttactgggagcaagcgctgtta
cgcgggcaatacaaccgggtcgtggtgtcgcaatggcatttttggcctcgtctttgggga
tgggccgacgacgtggtgtggttgacctttccccgcagtcgacggcggttcgaagaatcg
gccgcttggctttctccggccgggcaattatggtggagtcccgatggacagggcaatgcc
ccttccgtatatcggaagtggcaacgactgttgcctacccgcgaacggttggctcggagt
tggcggcattgggtcgaaggtcggcagggccttcagattggccgacaggtcgtaaaagac
cttgggctaagcccggactggactccgcgggacggcaaggtgccgcttgatcggagtttt
caatatcgctggacacagtatgagtggaacgatgcccggcaatggctgacgaaagagggg
aatcacgatgcaatggctgcaatacgtacgcgaaatacctga
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