Sulfobacillus acidophilus TPY: TPY_3609
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Entry
TPY_3609 CDS
T01576
Symbol
fadD
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
say
Sulfobacillus acidophilus TPY
Pathway
say00061
Fatty acid biosynthesis
say00071
Fatty acid degradation
say01100
Metabolic pathways
say01212
Fatty acid metabolism
say02024
Quorum sensing
say04146
Peroxisome
Module
say_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
say00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TPY_3609 (fadD)
00071 Fatty acid degradation
TPY_3609 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TPY_3609 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
TPY_3609 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
say01004
]
TPY_3609 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
say04147
]
TPY_3609 (fadD)
Enzymes [BR:
say01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TPY_3609 (fadD)
Lipid biosynthesis proteins [BR:
say01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TPY_3609 (fadD)
Exosome [BR:
say04147
]
Exosomal proteins
Exosomal proteins of breast milk
TPY_3609 (fadD)
Exosomal proteins of breast cancer cells
TPY_3609 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEJ41761
LinkDB
All DBs
Position
complement(3350570..3352351)
Genome browser
AA seq
593 aa
AA seq
DB search
MGFPVEHTNLVALIFGAIERHPQHVAQRYWNGQTWQDRTFRELGDVIRQTAEGLKSLGVS
PGERVAIMAKTRPEWIIADLAIQSLGAVTVPIYPSTPQEQVTYVVEDADIHRAIVESPDM
ADKWPPSVTIRWMTGDPVQRMDQWWGDRVPSLTPYPSRRSDLATIVYTSGTTGLPKGVML
THGNLLANIEAILALRATSPAFTVTREDVALSFLPLSHILERMVHLLFLSQGVTIAYAES
PERIPANLREIRPTVMVAVPRIFEKLYAAILDQMTRAGGVKRRLFDWAIRQGIRRYERFW
QWGGSRPVWGWADRWADRLVYRRIRQAVGGRLRFVISGGAALNPVIGQFFYAVGIPVIEG
YGLTETAPVLAVNWPDRPRYGTVGRPLPEVTLQLAPDGEILARGPNITPGYWNRPEETQE
AFQDGWFHTGDLGEWTPDGFLRVTDRKKYIIVLSTGKNVAPQAVEQKLLLSPWIEQAVVL
GNRQKYVAALLYLNPEKVQEWARLHHRDAPSYPELLQDAELSAFMMQEVERVTADLAPFE
RPKKVAFLPHELTEAAGELTPSLKVKMNVVEERYRSLIDTLFESVPVVGGRKG
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
gtgggattcccggtggaacacaccaatttggtggctttgattttcggcgcgattgaacgc
cacccccagcatgtggcccagcgttattggaatggccaaacctggcaagaccggacattt
cgggaattgggggatgtcatccgccaaacggccgaagggttgaaaagcctgggcgtgagt
ccgggggaacgggtcgcgattatggccaaaacccggccggagtggatcatagccgatttg
gcgattcagtctctgggggcggtaacggtgccgatttatccgagcactccccaagaacaa
gtgacgtatgtggtcgaagatgccgacattcaccgggccatcgtggaatcgcccgatatg
gcggacaaatggcccccctcggtgaccattcgctggatgacgggcgacccggtacaacgc
atggatcaatggtggggggatcgcgtgccgtccttgacaccctacccgagtcggcggtcg
gatttggccactatcgtatatacgtccggaacgaccggactcccgaaaggggtcatgctc
acccacggcaatcttttagccaatatcgaggcaattttagcgctacgcgccacatctccg
gcgtttaccgtgacgagggaggatgtggcgttatcctttttgcccctgtcccacattctc
gagcgcatggttcatttattgtttttaagccaaggggtcacgatcgcctatgccgagtct
cccgaacggattcccgccaacctccgcgaaatacggcccacggtgatggtggcggttcct
cgtatttttgagaaactttatgccgccattttggaccaaatgacccgggccggaggggtt
aaacggcgtctctttgattgggccattcgacaggggatccgccgatatgagaggttttgg
caatggggcgggtcccgaccggtatgggggtgggcggaccgttgggccgatcggctggtt
taccgacgcattcgacaggcggtcggcgggcggctccgtttcgtcatctccggcggcgcg
gccttaaacccggtgattggtcagtttttttatgccgtggggatcccggttattgaaggt
tatggtttgaccgaaaccgcccccgtattggccgtcaattggcctgaccgtccgcgatac
ggcacggtgggccggccgttacccgaggttaccctgcagttggccccggacggcgaaatt
ttggcgcgcgggcccaatattactcccggctattggaatcggccggaggaaacgcaagag
gcctttcaagacgggtggtttcataccggcgacctgggcgagtggacgccggacggtttt
ctgcgggtgaccgatcgcaaaaaatatatcatagtgttgtcgaccggaaaaaatgtggct
ccgcaggccgtcgagcaaaaattgctgctcagtccctggattgaacaagcggtcgtattg
ggtaatcgccaaaagtatgtcgcggcccttctatatcttaatcccgagaaagtccaagag
tgggcccgcctgcatcatcgggacgcgccgtcataccccgaattacttcaggatgccgag
ctttcggcttttatgatgcaggaggtggaacgcgtgacggccgacctggcgccgtttgaa
cgtccgaaaaaagtggcctttctgcctcacgaattaactgaagccgccggcgaacttacg
ccctcgttaaaagtgaaaatgaacgtggtcgaagagcgctaccgttcgttgattgacacg
cttttcgaatcggtgccggtcgtcggagggcgaaaagggtag
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