Shewanella amazonensis: Sama_0008
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Entry
Sama_0008 CDS
T00445
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saz03016
]
Sama_0008
Transfer RNA biogenesis [BR:
saz03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Sama_0008
Prokaryotic type
Methyltransferases
Sama_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
Ras
ABC_tran
GTP_EFTU
Gtr1_RagA
Arf
AGP
AAA_28
E217_gp29
Roc
SRPRB
MMR_HSR1_Xtn
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABL98220
UniProt:
A1S1G4
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All DBs
Position
complement(6502..7863)
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AA seq
453 aa
AA seq
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MTTDTIVAQATAPGRGGVGIIRVSGKLASDVAHTLLGHLPKPRYADFCDFKAADGSVIDQ
GIALFFKGPNSFTGEDVLELQGHGGQVVMDMLIRAVLKVKGVRIARPGEFSEQAFMNDKL
DLTQAEAIADLIDATSEQAAKSALHSLQGEFSTQVHTLVDKITNLRLYVEAAIDFPDEEV
DFLSDGKIAAALYAIIDQLDEVQASAKQGSIIREGMKVVIAGRPNAGKSSLLNALAGKES
AIVTDIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTTDEVERIGIERAWSEIASADRVLF
MVDGTDTAAVDPHEIWPDFIDRLPKAMGVTVVRNKADLTGEPLEATEEQGYSVYRISAKT
GLGVDALKQHLKSLMGYQSNLEGGFIARRRHLEALEQASEHLQLGKVQLEVYLAGELLAE
ELRMAQQALSEITGEFTSDDLLGKIFSSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacagacaccatagtggcacaggccaccgcgcccggtcggggcggcgtaggcatc
atccgggtatccggtaagctggcaagcgatgttgcccataccctgctgggacacctgccc
aaaccccgctacgccgatttctgcgacttcaaagcggccgatggcagcgtgattgaccag
ggtattgcccttttcttcaaaggccccaactcctttaccggcgaagatgtactggagctg
cagggccacggcggccaggtggtgatggacatgctcatccgcgccgtgctcaaggtcaaa
ggagtgcgtattgcccgccccggtgagttcagcgagcaagcctttatgaacgacaagctg
gatttgacccaggccgaagccatcgcagacctgattgatgccaccagcgaacaggccgcc
aagagtgccctgcactcactgcaaggcgagttctccactcaggtgcataccctggtggac
aaaataactaacctgcgcctgtatgtagaagccgccatcgactttcccgacgaagaagtg
gatttcttaagtgacggcaaaatagccgccgccctttacgccattatcgaccaacttgat
gaagtgcaggccagtgcaaaacagggcagcattatccgtgaaggcatgaaagtggtgatt
gccgggcgccccaacgccggtaaatccagcctgctcaatgccctggcagggaaagaatcg
gccattgtgaccgacatagccggcaccacccgcgacgtactgcgagagcatattcacctc
gacggcatgccgctgcacattattgataccgccggtctgcgggacaccacagacgaagtg
gagcgtatcggtatagagcgcgcctggagcgaaatagccagcgccgatcgggtgctgttt
atggtggatggcacagacactgccgccgttgacccccacgagatatggcccgattttatc
gaccgcctgcccaaagccatgggggttaccgtggtccgtaacaaggctgatctgaccggt
gaacctttggaagccaccgaagagcaaggctacagcgtgtatcggatttcggccaaaacc
ggcctgggtgtggacgctctcaagcagcacctcaaatccctgatgggttatcaaagtaac
ctcgaaggcggctttatcgcccgtcgtcgtcacctcgaagcattggagcaggcatctgag
cacctgcaactgggcaaggtacagctggaagtatatctggcaggtgagctgctggcagaa
gagctgcggatggcacagcaggcactgtctgaaattaccggcgaatttacctcagacgac
ttgctgggcaagattttcagttctttctgtatcggtaagtaa
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