Shewanella amazonensis: Sama_0025
Help
Entry
Sama_0025 CDS
T00445
Name
(GenBank) Glycine--tRNA ligase
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
saz
Shewanella amazonensis
Pathway
saz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sama_0025
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
saz01007
]
Sama_0025
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saz03016
]
Sama_0025
Enzymes [BR:
saz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
Sama_0025
Amino acid related enzymes [BR:
saz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Sama_0025
Transfer RNA biogenesis [BR:
saz03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Sama_0025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
ABL98237
UniProt:
A1S1I1
LinkDB
All DBs
Position
complement(23457..25526)
Genome browser
AA seq
689 aa
AA seq
DB search
MKFENLLIEIGTEELPPKALRTLAESFQANFSEELTKAELPFESIEWYAAPRRLALYVKG
LATAQEDKVVEKRGPAVQSAFDADGNPTKAAEGWARGNGITVAEAERLATDKGEWLVYRA
NVAGEPTSVLVPAMTQRALDKLPIPKPMRWGSNSTQFIRPVHTVTLLLGSELIAGEVLGI
QSDRTIRGHRFMGESSFSLDHADNYLAALKERGKVIADYQARKALIKADAEKAAAVIGGN
ADIEESLLEEVASLVEWPVVLTAHFEEKFLAVPAEALVYTMKGDQKYFPVFSNDGKLLPN
FIFVANIESKDPAQIIAGNEKVVRPRLADAEFFFNTDKKHTLASRLASLETVVFQKQLGT
LKDRAERISALAGFIAGQIGASSEDAARAGLLSKCDLMTNMVMEFTDTQGTMGMHYARLD
GEAEAVAVALEEQYKPKFSGDSVPSAGVSCAVALAEKLDTLSGIFGIGQAPKGAADPFAL
RRAAIGVLRIIVENKLPLDLVDLIAKAVELHGSNLSNALAADEVLEFLMGRFRAWYQDKG
ISTDVILAVLARRPTRPADFDDRILAVSHFRTLEQAAALAAANKRVSNILAKVEGELPSS
INDALLSEAAEKALAAKLAEVTPVIAPLFAAGNYQQALTELAALRESVDQFFEDVMVMAD
DQALRNNRLALLGNLRDQFLHVADISLLQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaaaacctgctcatcgaaattggtaccgaagagctgccacccaaagcactg
cgcaccctggccgaatcctttcaagccaacttcagcgaggagctgaccaaggctgaactg
ccatttgaatctatcgaatggtatgccgccccacgtcgcctggccctgtacgttaagggg
ctggcaaccgcgcaggaagacaaggtagtagaaaaacgcgggcctgcggtgcagtccgcc
ttcgatgccgacggtaatccaaccaaggccgccgaaggctgggcccgtggtaacggcatt
accgtggcagaggccgagcgtctggccactgacaaaggcgaatggctggtttatcgtgcc
aatgtcgccggtgagcctacatctgttttggtgcctgcgatgacccagcgcgcactggat
aagctgcctatccccaagccgatgcgctggggcagcaacagcactcagtttatccgccct
gtgcacacagttaccctgctgcttggcagcgaactgattgccggtgaagtgctgggtatt
caatctgaccgcactattcgtggccaccgctttatgggcgagtccagcttcagcctggat
catgccgacaactacctggccgccctgaaagagcgcggtaaagttatcgccgactatcag
gcccgtaaagccctcatcaaggccgacgccgagaaagccgctgctgtgattggtggcaac
gccgacatcgaagagagcctgctggaagaagtggcctcactggttgaatggccagtggta
ctcaccgcccactttgaagagaagttcctggccgtgcctgccgaggcgctggtgtacacc
atgaaaggtgaccagaagtacttcccggtattctcaaacgacggcaagctgctgccaaac
ttcatctttgtggccaacatcgagtccaaagatccggcgcaaatcattgccggtaacgag
aaggtggttcgtccacgtctggccgacgccgaattcttcttcaacaccgacaaaaaacac
acccttgcaagccgtctggcgagcctggaaaccgtagtattccagaagcaactgggcacc
ctgaaagaccgcgccgagcgcatctctgccctcgctggctttatcgcgggtcagattggc
gccagcagcgaagacgccgcccgtgcaggtttgctgtcaaagtgcgacctgatgaccaac
atggtgatggaatttaccgatactcagggcaccatgggcatgcactatgctcgcctcgac
ggtgaagccgaagccgttgctgtggcactggaagagcaatacaagcccaagttcagtggc
gacagcgtgccaagcgccggtgtttcctgcgccgtggctctggccgagaaactcgacacc
ctgtctggcatcttcggtatcggtcaggcgccgaaaggcgctgctgacccgttcgcgctg
cgccgtgctgccattggtgtgctgcgtatcatagttgagaacaagctaccgctggatctg
gttgacctgattgccaaagccgttgaactgcacggtagcaacctcagcaatgccttggct
gccgatgaagtgcttgagttcctgatgggccgcttccgcgcctggtatcaggacaaaggc
atcagcaccgacgttattcttgccgtattggcccgtcgtccaacccgacctgcggatttt
gatgaccgaattctggcggtaagccacttccgcaccctggagcaggccgcagcacttgcc
gccgccaacaagcgtgtatccaacatcctggccaaggtggaaggtgaactgccaagcagc
atcaatgatgcgctgctgagtgaagccgctgaaaaagcactggcagccaagcttgccgaa
gtaacgccggtcattgccccactgttcgctgccggtaactaccaacaggctctgactgaa
ctggctgccctgcgcgagagcgtggatcagttcttcgaagacgtgatggtcatggccgac
gaccaggcgcttcgcaacaaccgtctggcactgcttggcaacctgcgcgaccagttcctg
cacgtagccgacatttctctgcttcaataa
DBGET
integrated database retrieval system
