Shewanella amazonensis: Sama_0081
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Entry
Sama_0081 CDS
T00445
Name
(GenBank) transcriptional regulator, histidine utilization repressor, GntR family
KO
K05836
GntR family transcriptional regulator, histidine utilization repressor
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saz03000
]
Sama_0081
Transcription factors [BR:
saz03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Sama_0081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_11
HTH_Crp_2
HTH_36
MarR
HTH_20
RP-C
HTH_IclR
AbiEi_4
HTH_24
DUF7342
HTH_23
SoFic-like_C
HTH_Tnp_4
Rrf2
DUF977
PaaX
DUF4423
HTH_7
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
ABL98293
UniProt:
A1S1N7
LinkDB
All DBs
Position
89362..90066
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AA seq
234 aa
AA seq
DB search
MATAKFAEIKEYIRRHIEAGEWEENTRVPSENQLAEQFGCSRMTARRALTELVEAGVLER
SQGLGTFVASLKSQSSMLSIRNIADEIKGRGHGHSVQVVELAAINAIPPIAIALGLEEGT
EVFYSLLVHCEQGIPLQLEERFVNPSLAPGYLRQDFSQLTPHEYLSHVAPLTEARHTIEA
IMPKEQIRNSLNIPEGEPCLQIIRRTWSRQGVVSFARLVHPGSRFRLGGHLTFK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggccacagccaagtttgccgaaatcaaagaatacatacggcgccacattgaagcgggc
gaatgggaagaaaatacccgggtgccctcggagaaccagctcgccgagcagtttggctgc
agccgtatgaccgcccgccgcgcgctgactgaattggttgaggcaggggtgttggagcgc
tctcaggggctaggtacctttgtggcgtcactcaagtcccagtcaagcatgttgtctatt
cgcaatatcgctgatgaaatcaaggggcgcggtcatggccacagtgtgcaggtggtggaa
ttggccgctatcaatgccatccccccgatcgctattgcccttgggctggaggagggcact
gaagtgttttactcattgctggtgcattgcgaacagggaatacccctgcaactggaggag
cgttttgttaatcccagtctggcgcccgggtatcttaggcaggatttcagccaactgaca
ccccatgagtatctgtcgcacgtcgccccgctgacggaggcgcgtcataccatagaggcg
attatgcctaaagagcagatccggaacagcctgaatatacccgaaggcgaaccctgcctg
cagatcatccgtcgtacctggtcccgtcagggggtagtgagttttgcccgcttggttcat
cccggcagtcgttttcgtcttggtggccaccttacctttaaatag
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