Shewanella amazonensis: Sama_0131
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Entry
Sama_0131 CDS
T00445
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saz02000
]
Sama_0131
Transporters [BR:
saz02000
]
Other transporters
Pores ion channels [TC:
1
]
Sama_0131
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
CFAP143
Motif
Other DBs
NCBI-ProteinID:
ABL98343
UniProt:
A1S1T7
LinkDB
All DBs
Position
146791..148878
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AA seq
695 aa
AA seq
DB search
MTLKPPAFALSLLSLSLLPLLGHASETRDPLLNIADVIVVRGEKPTAEALATTHWRIDAE
DIRNSGAQTLDQVLATVPGIHVRTGGEGTPRIDIRGLKTRHVTLLINGVPAASAADGQFD
PSVIPTSQIAAVDIAVGPASVLYGPGGAGGVINVITRSGDEASVSGKLEFAGSDTLNADV
ALGGGGDNWQGFVSAGKQKRESWPLSDDYQEAPNQPAGDRLNADREVDNFYGQGSYWLSD
ATQLTANINLREGDWGKPGRDGSGSGRAKFERVDDYRNISSQLGLAHRFGNGMTLRGYGY
YNRTETLESAYTDISFSDLDSQQRGESTVQGLNLQLVTELGRHSLLTLGAGAEEQRWDEL
ATQYSTSDSGSGSGSGGGSGGGSGSGTGGGSGGGSGGGSGSGSGGGSGSGSGGGSSSGVP
TETGFDDSAWVYSLAAEYQYQRDNWGATLGGAWYQRDGDTSVDEPSAMAALYWQALSQTR
LSASAARKVRFPSMENLYSLSAGNGELTAETSEHWELGLEQGFALGSFEVYGYETGADDY
IAKGTDGIYANLGDYRFRGVDARLLISPLQALDVSLSYSFLDSEDKTPDSTEALQYRPRH
QYGLTLDYRFDTDTRVHLSWQKVMDQIYFERSGKTMVERNLPDYDLLDLKLSQSFYDDKL
ALYIRATNLLDENYAESESLPQAGRQWFIGMDWRL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaaaccacccgctttcgcactatcgctcttgtctctttccctgcttcccttg
ctggggcatgccagcgagacccgtgatcctctgctcaatattgccgatgtgattgtggtc
cgcggtgaaaagcccaccgccgaagcgctggcaaccacccattggcgtattgatgccgag
gatattcgcaacagcggtgcccaaacgctggatcaggtgctggctacggtgcccggcatc
catgtgcgtaccggtggggagggtacgccccgaattgatatccgtggtcttaaaacccgt
cacgttaccctgctgattaacggggtgccggccgccagtgccgcagatggccagttcgat
cccagtgtgatcccaaccagccagattgccgctgtcgatatcgccgtgggtcctgcgtcc
gtgctctatggcccgggtggtgcaggtggcgtaatcaacgtgattacccgcagtggtgac
gaggcttcggtatccgggaagcttgagtttgccggttcggataccctcaacgctgacgtg
gcattgggtggcggtggcgacaactggcagggctttgtcagcgcgggtaagcaaaagcgc
gaaagctggccgttgtcggatgattaccaggaagcgcccaatcaacccgcaggtgatcgc
ctcaacgccgacagggaagtagacaatttttatggccagggcagctactggctgtcagat
gccactcaactgactgccaacattaatttgcgcgagggcgactggggtaagccgggccgt
gacggcagcggctcaggacgtgccaagtttgaacgtgtggatgactaccggaatatcagc
agtcaattgggcctggcccatcgctttggcaacggcatgacgctcaggggctatggctac
tacaaccgtaccgaaaccctggagtctgcctacaccgacatcagtttcagtgacctcgac
agccagcagcgcggcgagtccacggtgcaggggctgaatctacaacttgtcacagagctt
ggccgtcacagtctccttactctgggtgctggtgccgaagaacagcgctgggatgagctg
gcgactcaatattcgacctctgactcaggctcgggcagtggttcaggcggtggttcaggc
ggtggctctggcagtggtacaggcggtggttcaggcggtggctcgggcggtggttcgggc
agtggctcgggcggaggttcaggcagtggctccggcggcggctccagcagcggtgtaccc
acagagacaggctttgacgacagtgcctgggtgtacagtcttgcggccgagtatcaatat
caacgggataactggggtgcaacccttggcggtgcctggtatcagcgtgatggcgatacc
tcggtggatgagccttcggccatggccgcactgtactggcaggcgctgtctcagacacgt
ctgagcgcttcggcggcccgcaaggtgcgcttcccctccatggaaaacctgtattcactt
tctgcaggcaatggcgaactgaccgctgagacttcagagcattgggagttaggtctggag
cagggcttcgccctcggcagtttcgaggtttatggttacgagaccggcgccgatgattac
atcgccaagggcacagatggtatctacgccaatctgggtgactatcgattccgcggtgtg
gatgcgcggctgttgatatcacctttgcaagcgctggatgtctctctgagctacagcttc
ctcgacagtgaagataaaacaccggacagcaccgaagcgctgcaatatcgcccgcgccat
cagtacggcctgaccctggattatcgcttcgacaccgatacccgggtgcacctgtcctgg
cagaaggtgatggatcagatttactttgagcgcagcggcaaaaccatggtcgagcgtaac
ctgccggactacgacctgcttgacctcaagctgtcgcagtcgttttacgatgacaagctg
gcgctctacatcagggccactaacctgctggacgaaaactacgccgagagcgagtctctg
ccccaggcgggtcgccagtggtttatcggtatggattggcgcttgtga
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