Shewanella amazonensis: Sama_0339
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Entry
Sama_0339 CDS
T00445
Name
(GenBank) membrane protein involved in aromatic hydrocarbon degradation
KO
K06076
long-chain fatty acid transport protein
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saz02000
]
Sama_0339
Transporters [BR:
saz02000
]
Other transporters
Pores ion channels [TC:
1
]
Sama_0339
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toluene_X
PmbA_TldD_1st
Motif
Other DBs
NCBI-ProteinID:
ABL98550
UniProt:
A1S2E4
LinkDB
All DBs
Position
408539..409897
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AA seq
452 aa
AA seq
DB search
MIMKKSVLTFAVSAALMGITTQVNAAGFQLAEYSATGLGRAFAGEAAMADNAAAQARNPA
MLAYLSGRQVSGGGIYVATEVDVTGDVHIASPVLGPQGVTLNADAYDVADSALIPNFYYS
SQINDNWTWGLAVNSNYGLATELPATHAASLFGHHTEITTVEFNPNIAYRLNDAVTLGAG
VRIVYGDGSIGAATPYWVGAIKANPNLPAQIAARLPEPGTVLKTMEGDDVSYGWQVGGSW
QPSENHRFGLAYHSGVELELSGSAAGLVYTGGQNLDIEGYLPLELPAFAELSSFHQLSDD
VALHASVNWTQWSVFDRLVAYFPGETKPVGGIESDLVKEENFKDSWRVAVGSTWNVNKDW
TVRSGFAVDRTAVDDEFRTTTIPDSDRLWFSLGAGYRASENLTVDMAITYIRAHGFAPID
EHQDLAGLAQVSFNGEAGGSVWLAGVQLSYKM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaaagagtgtactgacttttgccgtatcagcggctcttatggggattacg
actcaggttaacgctgctggcttccagctggctgaatactctgccactggtcttggccgt
gcttttgccggtgaagcggccatggccgacaacgccgcggctcaagcgcgtaacccagcc
atgctggcatacctgagcggtcgtcaggtatccggcggcggtatctacgtcgctaccgaa
gtggacgtgaccggcgatgtgcacattgcgtctccagtgcttggtccgcagggtgtgacg
ctgaatgccgacgcctatgacgttgccgacagtgcacttatcccaaacttctattactca
agccaaatcaatgacaactggacctggggtctggctgttaactccaactacggcctggcc
accgagctgcctgccactcacgcggcctccttgtttggccatcacaccgaaatcaccaca
gttgagttcaaccccaacatcgcatatcgcctgaacgatgcggtgactttgggtgccggt
gtgcgcattgtttacggtgacggtagcattggtgcagctacaccttactgggtgggcgcc
atcaaggccaatccaaacctgccagcacaaattgccgcccgtctgcctgagcctggcact
gtgctcaaaaccatggaaggcgatgatgtaagctacggctggcaagtgggcggtagctgg
cagccttctgaaaaccacagattcggcttggcttatcacagcggtgtagagctggagctg
tccgggagcgctgctggtcttgtctacactggtggccagaacctggatattgaaggttat
ctgccactggagctgccagcttttgccgagttgtcttctttccatcagctgagtgatgat
gtggcgctgcacgccagcgttaactggacccagtggagtgtgttcgaccgtctggtggct
tacttccccggtgaaaccaagccagtgggtggcatcgagtccgatctggtgaaagaagag
aacttcaaggacagctggcgcgttgccgtaggttctacctggaacgtaaacaaagactgg
accgtacgcagcggctttgcggttgaccgcactgcagtggatgatgagttccgtaccacc
accatccccgactctgaccgcctgtggttcagtctgggtgccggttaccgcgccagcgaa
aacctgaccgtggatatggccatcacctatattcgtgcccacggtttcgcgcctatcgat
gagcatcaggatctggccggtctggctcaggtcagctttaacggtgaagccggtggcagc
gtgtggctggccggtgtgcagttaagctataagatgtaa
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