Shewanella amazonensis: Sama_0350
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Entry
Sama_0350 CDS
T00445
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
saz
Shewanella amazonensis
Pathway
saz00300
Lysine biosynthesis
saz00550
Peptidoglycan biosynthesis
saz01100
Metabolic pathways
saz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sama_0350
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sama_0350
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Sama_0350
Enzymes [BR:
saz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Sama_0350
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Paralog
Gene cluster
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ABL98561
UniProt:
A1S2F5
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Position
419389..420756
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AA seq
455 aa
AA seq
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MIPLSLTQLAAATHGRLCGEDVVVSHLDSDSRKMTVGSLFVALKGERFDGHEFAEAAAAA
GASALLVERELPLALPQLVVADTQKAMGQIGALVRDSVNPVCVALTGSNGKTSVKEMVAT
VLSQHHSVLFTAGNFNNEIGVPLTLLRLEQGHEYGVFELGANHKGEIDYTSSLVRPSVSL
VNNVGSAHLEGFGSEAGVAEAKSEIYLHLAQDGVGIVNLDDRYAETMLNKLKGKRVLTFG
LGAGAEITAREVTADAFGRYSFYLCHGGDHVTVSLPLAGKHQVSNALATAAICIALGLPL
QEIAAGLAKLAPVKGRMMPRQLGRLLLVDDSYNANPNSVGAAIDWLKEISTNRTLVLGDL
GELGDNAALLHFELGQKAKEAGLDSLFCLGSLSRHASQAFGSKHFEELDALVSELINYIN
GVEGDVTLLVKGSRSAAMERVVEALTAAHGRGELK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgatccctctgagtctgactcaattggcggcagccacccatgggcgtctttgtggcgag
gatgttgtcgtgtcacatctcgacagcgacagccgaaaaatgaccgtgggcagcttgttt
gtggcattgaagggtgagcgttttgacggccatgagtttgccgaagccgccgcagcagca
ggggcatcagcgcttttggttgaacgtgagctgccgctcgcgctgccacaactggtggtt
gccgatacacaaaaggccatgggccaaattggcgccctggtgcgcgacagcgtaaatcct
gtttgtgtggcactgaccggctcaaacggcaaaaccagtgtaaaagagatggtcgccacc
gtgctgtcgcaacatcattccgtgctctttaccgcaggtaactttaacaatgaaatcggt
gtgcctctaaccctgctgcgtctggagcaggggcacgagtatggggtatttgagctgggt
gcgaaccacaagggcgagattgattacacctcatcactggttcgtccttcggtgtcactg
gtcaacaatgtgggcagcgctcaccttgaaggttttggctcagaggccggtgttgccgag
gccaagtccgaaatctatctgcatctggcgcaggacggtgtggggattgtgaatctcgac
gaccgctacgcagagaccatgctcaacaagctcaagggaaagcgggtactgacctttggg
ctgggtgccggggccgagattaccgcccgggaagtgactgccgatgccttcggcagatac
agcttttacctctgccatggcggagaccatgtgactgtgagtttgccgctggcaggcaag
catcaggtgtccaatgcgctggcaacggccgccatctgcattgccctgggcttacctttg
caagagatagcagcgggtcttgccaaactggctccggtcaagggacgtatgatgccacgc
cagttgggacgactgctgttggtggacgacagctacaatgccaatcccaattcagtgggg
gctgccatcgactggctgaaagaaatttctacaaacaggaccctggtactgggcgatttg
ggtgaattaggcgacaatgctgcccttttgcactttgagctggggcagaaggccaaagaa
gccgggctcgacagcctgttttgtctgggcagtttgagccgccatgccagccaagccttt
ggcagtaaacatttcgaagagctggatgctctcgtgagtgaattgattaactatatcaac
ggggtagagggagatgtgaccctgttggtgaaagggtctcgcagcgccgccatggagcgg
gttgtagaggccttaacagccgcccatgggcgcggggagctgaaataa
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