Shewanella amazonensis: Sama_0368
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Entry
Sama_0368 CDS
T00445
Name
(GenBank) type IV pilus biogenesis protein PilC
KO
K02653
type IV pilus assembly protein PilC
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
saz02044
]
Sama_0368
02035 Bacterial motility proteins [BR:
saz02035
]
Sama_0368
Secretion system [BR:
saz02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Sama_0368
Bacterial motility proteins [BR:
saz02035
]
Pilus system
Pilus assembly proteins
Sama_0368
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF1673
Motif
Other DBs
NCBI-ProteinID:
ABL98579
UniProt:
A1S2H3
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All DBs
Position
complement(444884..446143)
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AA seq
419 aa
AA seq
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MATAVANKSKKQTQKLAPKVYNFEWKGLNRDGKKSSGELRGASVAEIKTLLKNQGINPKV
VRKKSDGLFGASNKKINAMDIAMVTRQIATMLMAGVPLVTTIEILGKGHEKPKMRELLGT
ILNDIQAGIPLSDALRPHRIYFDDLYVDLVAAGEHSGSLDTVFDRIATYREKAEALKSKI
KKAMFYPAAVVVVAIAVTTLLLLFVVPQFEEIFTSFGAELPAFTQLIINISRFLQSSWYF
FLTAIVGSIWLYVRAHRNSQAVRDRQDEFVLKIPVIGEILHKAAMARFARTLATTFAAGV
PLIDGLESAAGASGNAVYRKALLRIRTEVMAGMQMNVAMRTVNLFPDMLIQMVMIGEESG
SLDNMLNKIANIYEMQVDDAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQMGNVVG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggccacagccgtcgcaaacaaatccaaaaagcagacacaaaagctagctcccaaggtc
tataactttgaatggaagggcttaaaccgagatggcaaaaaatccagcggtgagctcagg
ggcgcgtctgttgccgaaattaaaacccttcttaaaaatcagggtataaaccccaaggta
gttcgtaagaagtctgatggcctttttggtgccagcaataaaaagatcaatgcgatggac
atcgccatggtcacccgccaaatagccaccatgctgatggcaggtgtgcccttggtgacc
accatagaaatcctcggtaaaggccatgaaaagcccaagatgagagaattgcttggcacc
attcttaacgacattcaggcaggtattccactctctgatgcactgcggccccacagaatt
tactttgatgacttatacgtagacctggtggccgccggtgagcactcgggttcactggat
actgtttttgacaggattgcaacttatagagaaaaagcagaagccctgaagtccaaaatc
aaaaaggccatgttttatcccgctgcggtcgtggtggttgcgattgctgttaccaccttg
ctgctgctcttcgtagtaccccagtttgaagaaatttttaccagtttcggtgctgaactt
cctgcattcacccagctcattatcaatatctcacgatttctgcagtcatcttggtatttc
ttcctcaccgccatcgttggctctatctggctctatgtccgcgcccaccggaattctcaa
gcagtacgcgataggcaagacgagtttgtgcttaaaatccctgtgattggagaaatctta
cacaaggctgccatggcccgctttgcccgcaccctggcgaccacctttgcagctggtgtt
cccctgattgatggcctggagtctgcggcaggtgcttctggtaatgccgtttaccgtaaa
gcacttttgcgaattcgcaccgaagtgatggccggtatgcaaatgaacgtggccatgcgt
accgttaacctcttcccggatatgctcattcaaatggtgatgattggtgaagagtcaggt
tcgctggataatatgctcaacaaaattgccaacatctatgagatgcaggtggatgatgcc
gttgatggcctctcgagcctgattgaacccattatgatggtggttatcggtacccttgtc
ggcggcctgattgtgggtatgtatctgcctatcttccagatgggtaatgtggttggctaa
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