Shewanella amazonensis: Sama_0693
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Entry
Sama_0693 CDS
T00445
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saz03000
]
Sama_0693
Transcription factors [BR:
saz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sama_0693
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ABL98901
UniProt:
A1S3E5
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All DBs
Position
856788..857765
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AA seq
325 aa
AA seq
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MDNPRLKQLSIRLLQVFITVVRLGNVSAAARQLHLTQPTVSLQLKKIAELVGEPLLESRD
GVMRPTDVGEEVYRAACDILSRLDDLDDFLGGIKQGESGHIRIGLVTTAKYVMPRILGPF
YRRFPKVQVTLSIGNRAHVLNRFAHQEDDLYLFSHPPAGESVLASRIITNPLKLIAPADH
WAVGQKGLGFDVLKGERFIMREPGSATRMMFESWLSARGIELTDIMQIESNEAIRLSVAS
GLGLSVISAHTLSEGDMGPEKPAVLDVADFPLRSNWYLVARRDKRLPQSALQLIRFMAEH
LGDCIDPGYVADNIEALHRVFTPSR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggataaccccagacttaaacaactcagtataagactgctgcaggtcttcattaccgtg
gtgcgccttggcaatgtgtcggccgcggccagacagctgcatctcactcaacccacggtt
tctctgcagttgaagaagattgccgagctggttggggagccattactggaaagccgggat
ggcgtcatgcgaccaaccgatgtgggtgaggaagtgtaccgggccgcctgcgatatactc
tcgcgccttgatgatttggacgattttcttggcggcataaaacaaggggagagcggtcat
attcgcatcggacttgtcaccacggccaagtatgtgatgccccgcattctggggcctttt
tatcgtcgcttccccaaggtgcaggtgacgctgagtataggtaaccgtgctcatgtgctg
aatcgctttgcccatcaggaggatgacctctacctcttcagccatccacccgcaggggaa
tctgtgctggcttcgcggattatcaccaatccgcttaaattgattgccccggccgatcac
tgggcggtggggcaaaaaggccttggatttgacgtgctcaagggcgagcgttttattatg
cgcgagccgggttcggccacccggatgatgtttgaaagctggctcagtgcccgtggcatc
gaactcactgacatcatgcaaatcgagagtaatgaagcgatacggttaagcgtggcatcc
gggctggggttgtcggtgatttctgcccataccctcagcgagggcgatatggggcctgaa
aagcctgcggtgctggacgtggcggattttcccctgcgcagcaactggtatctggtggca
cggcgcgataaacggctcccccagagcgcattgcagcttattcgttttatggcagagcat
ttgggggactgtattgaccccggttatgtggccgacaacatagaggcactccaccgcgtc
ttcaccccttcccgttaa
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