Shewanella amazonensis: Sama_0726
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Entry
Sama_0726 CDS
T00445
Name
(GenBank) ErfK/YbiS/YcfS/YnhG
KO
K19235
L,D-transpeptidase YbiS
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
saz01002
]
Sama_0726
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
saz01011
]
Sama_0726
Peptidases and inhibitors [BR:
saz01002
]
Cysteine peptidases
Family C82
Sama_0726
Peptidoglycan biosynthesis and degradation proteins [BR:
saz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Sama_0726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
ABL98934
UniProt:
A1S3H8
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All DBs
Position
complement(891361..892275)
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AA seq
304 aa
AA seq
DB search
MKPVFSLVIFFSLISFCQSALAVIYPLPAKDSRLVGENQYYVVPDDKRTLEDIAAQFQLG
LSNLMEANPGVDPFLPKPGSTLIIPHQLILPDAPREGIVINIAEMRLYYYPKGKKIVEVL
PIGIGQVGRDTPENWVTTVQRKRANPTWTPTARIRKEYAAKGVTLPPVWPAGPDNPMGLF
ALYIGNLYAIHGTNATFGIGLRVSQGCVRLRDTDIEHLFNSVPVGTRVQFVNQPIKATEE
PDGARYLEVHQPLSRTQAEFDSAEPVPLTLPTAISRFVAHAETDSFVLKRLLEARTGMPT
RINP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgtttttagcctcgtcatatttttcagcctcatcagcttctgccaatcggca
ctggcggtgatctatcccctgccagccaaagacagccgtttggtgggagaaaaccagtat
tatgttgtgcctgacgataagcgcaccctcgaagacatagccgctcagtttcagttgggt
ctgtcaaacctgatggaagccaacccgggggtcgaccccttcctgcccaagccaggcagt
accctgatcattccccatcagctgatcctgcccgatgcgcccagggaaggcatagtgatc
aacatcgccgagatgcggctctattattaccccaagggcaaaaaaatcgtggaagtactg
cccatagggattggccaggtaggccgtgacaccccggaaaactgggtcaccacggtgcag
cgtaaacgcgccaacccaacctggactcccactgcgcgtatccgcaaggaatatgcagcc
aagggcgtgaccctgccccccgtgtggccggctggccccgacaaccccatggggctcttt
gcactttatattggcaacctttacgccatccacggcaccaacgccacctttggtattggt
ttgagagtaagccagggctgtgtgcgtctgcgtgacaccgacatcgagcatctgttcaac
agtgtgcccgtgggtacccgggtgcagtttgtgaaccagcccatcaaggccaccgaagag
cccgatggcgcgcgctacctcgaagtgcaccagccgctgtcacgtactcaggctgagttt
gattctgccgagcctgtgccactgactctacccacggccatcagccgctttgttgctcat
gccgaaaccgactccttcgtgctcaagcgtctgctggaagcccgtaccggcatgccaacc
cgcatcaacccctga
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