Shewanella amazonensis: Sama_0727
Help
Entry
Sama_0727 CDS
T00445
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis family
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saz03000
]
Sama_0727
Transcription factors [BR:
saz03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sama_0727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
AAA_5
GAF_2
AAA
Mg_chelatase
AAA_2
HTH_8
AAA_16
MCM
AAA_22
IstB_IS21
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABL98935
UniProt:
A1S3H9
LinkDB
All DBs
Position
complement(892404..893924)
Genome browser
AA seq
506 aa
AA seq
DB search
MPLNQTLLTRIALDITSGLSHRDRFARLVDTVKANLGCDAAALLEFRDRHFVPLATAGLA
EDVAGRHFAIDSHPRLEAIARAGDLVRFPADSALPDPYDGLIPNQEDRLHVHACIGLPLF
DDEKLIGALTLDAFDPQRFDNLGTMELRALGALSAASLKNALLLDKLERVSLLGHGSREA
NNDTPPMVGNAPVMESLRQEILAVAGTDLSVLILGETGTGKELVARAVHQASPRANKALV
YLNCAALPESVAESELFGHVKGAFTGAISHRSGKFETADKGTLFLDEIGELPLGLQAKLL
RVLQYGDVQRIGDDRSLKVDVRIIAATNKDLKQEVLAGRFRADLYHRLSVFPLHVPPLRE
RPEDLGPLCGHFLEQSRKSLGLSVLRIRPDALSRLKNHDWPGNVRELEHVIKRAATLARA
ASDDGAVMIEPQMLAIGGQSASLPVQSPVTGAQVEGKNLKEATDAFQAAYIGQILSANRG
NWASTARALGLDPGNLHRLAKRLGLK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcaaccaaaccctgctcacccgcatcgcactggacatcacttccggcttgtcg
caccgtgaccgctttgccagactggtggacacagttaaagccaatctgggttgtgatgcc
gccgcgctgctggaattccgcgaccgccattttgtgccccttgccacggcagggctggcc
gaagacgtggccggacgccactttgccatcgacagccacccgcgcctcgaagccattgcc
agagcaggcgatctggtacgcttccccgccgacagtgccctgccagacccttacgacggc
cttattcccaatcaggaggacaggctgcacgtgcacgcctgcattggcctgccactgttt
gacgatgaaaaattgataggcgccctgacactggatgccttcgacccgcagcgattcgat
aatctgggcaccatggagctcagagcacttggcgccttaagtgctgcatctttgaaaaat
gccctgctgctggataaattggagcgggtgtcgctgcttggtcatggcagtcgcgaggca
aataacgataccccgcccatggtaggcaatgcccctgtgatggagagcctgcgtcaggaa
attctggcggtggcaggcacggatctgagtgtactcatactgggcgaaacaggtacaggc
aaggagctggtcgcccgcgccgtgcaccaagccagcccacgggccaataaagcactggtg
tacctcaactgcgccgccctgcctgaatcggtggccgaaagtgagctttttggccatgtg
aaaggggcctttaccggcgccatcagtcaccgcagcggtaaatttgaaactgccgacaag
ggcaccttgttcttggacgaaatcggtgagctgccactgggactgcaggcaaagctcctc
cgtgtactgcaatacggtgatgtgcagcgcatcggcgatgaccgcagcctcaaggtggat
gtacgcattattgccgccaccaataaggatctgaaacaggaagtactggccggtcgtttc
cgcgctgatctgtatcatcgtctcagtgttttcccgcttcacgtgccgccgctgagggag
cggccggaagatcttggccccctgtgcggtcattttcttgagcagagccgcaagtctctc
gggctgtcggtgctcagaataaggcccgacgccctgagtcgcctgaaaaaccatgactgg
ccgggcaacgtgcgcgagcttgaacacgtgataaaaagggctgccaccctggccagagcc
gccagcgacgacggcgccgtgatgatagagccccagatgctcgccatcggtggccagagc
gcatcactgccagtgcaaagcccggtgacgggcgctcaggtggaaggcaaaaacctcaag
gaggctactgacgcatttcaggcggcttacataggccagatcctcagcgccaatcgcggt
aactgggcctccaccgccagagcacttggactggatcccggtaacctgcaccggctggcc
aaacggctcggattgaaataa
DBGET
integrated database retrieval system
