Shewanella amazonensis: Sama_0752
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Entry
Sama_0752 CDS
T00445
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saz03009
]
Sama_0752
Enzymes [BR:
saz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Sama_0752
Ribosome biogenesis [BR:
saz03009
]
Prokaryotic type
rRNA helicases
Sama_0752
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
Cas3-like_C_2
ResIII
AAA_30
CMS1
AAA_19
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABL98960
UniProt:
A1S3K4
LinkDB
All DBs
Position
complement(927691..929094)
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AA seq
467 aa
AA seq
DB search
MSTSDTQPSLAFSTLKLKTELLENLSSMGYHEMTPIQAQSLPAILAGEDVIGQGKTGSGK
TAAFGLGLLNKLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMG
PQVGSLEHGAHIIVGTPGRIVDHLERDRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIAR
SPRERQTLLFSATFPEQIQTIAQQVMYNPVMVKVATTHEKSTIAQHFYHLEDDGARMQAL
QLLLLEHKPESAVVFCNTKRETQKVADDLTAAGFSVLALHGDLEQRDRDETLLQFANKSA
CVLVATDVAARGLDIDALDAVFNYHVAHDTEVHIHRIGRTGRAGSKGAAYTFFNDKDGYK
IALLEEYLERDIQSEPLPSASLLGSMPLAPAMITLQIDGGKKDKLRPGDILGALTGDKGI
EGAQVGKILVTDYRAYVAVDRKVAKKALGKITSGRIKGKSYRAWLMK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacttcagatacccagccttcactggctttttccacccttaagcttaaaaccgaa
ctgcttgagaacctgtcctccatgggctaccacgagatgacgcccattcaggcacagagc
ttgccagccattctggcgggtgaggatgtgattggtcagggcaaaaccggctcgggtaaa
accgcggcctttggtctggggttactgaataagctggatgtgaagcgttttcgcattcaa
accctggtgctgtgccctacccgggaactggccgaccaggtggcgcaggaaatccgcacc
ctcgcccgcggtatccacaatgtaaaagtactgaccctctgcggcggcgtacccatggga
ccacaggtgggctcgctggagcatggcgcccacattatcgttggtacgccggggcggatt
gtcgatcaccttgagcgtgaccgcctcgatttgagcaacctcaatatgctggtgctcgat
gaagccgaccgcatgctggaaatgggctttcagccgcagctcgatgccattattgccaga
agcccgagggagcgtcagaccctgctgttcagcgccaccttccccgagcagattcaaacc
attgcccagcaggtgatgtacaaccctgtgatggtgaaagtagccacaacccacgaaaag
agcaccatagcccagcacttctaccatttggaagacgacggcgcgcggatgcaggcgctg
caattgttgctgctcgagcacaagcccgagagcgcggtggtgttctgtaacaccaagcgc
gaaacccagaaggtggccgatgaccttactgctgcaggtttcagcgtactggcgctccat
ggcgacctggagcaacgcgacagagacgaaaccctgctgcaatttgccaacaagagcgcc
tgcgtgctggtcgccaccgacgtggccgcccgaggtttggatatcgacgccctcgatgca
gtattcaactaccacgtggcccacgataccgaggtacacattcaccgcattggccgcacc
ggccgtgcgggcagcaaaggggccgcctataccttcttcaacgacaaagacggctacaag
atagccttgctggaagagtacctggagcgcgacattcaaagtgagccactgccgtcagca
agcctccttggcagcatgcctttggcgcctgccatgatcaccctgcaaatcgacggcggc
aaaaaggataagctgcgccccggcgatattcttggcgccctcaccggtgacaagggtatt
gaaggtgcccaggtgggtaagattctggtgacagactaccgtgcttacgtagccgttgat
cgcaaggtggctaaaaaggcgctgggtaaaatcacctccggccgcattaagggcaagtct
taccgagcctggctgatgaagtaa
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