Shewanella amazonensis: Sama_0811
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Entry
Sama_0811 CDS
T00445
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saz03400
]
Sama_0811
Enzymes [BR:
saz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Sama_0811
DNA repair and recombination proteins [BR:
saz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Sama_0811
Prokaryotic type
Sama_0811
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABL99018
UniProt:
A1S3R2
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All DBs
Position
995865..997292
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AA seq
475 aa
AA seq
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MNTLVWFRQDLRTIDNQALTRACEDANARGGKVHALFIASPGQWQRHDMGVRQQRFLLAN
LNALGEELASMGIPLSLLKVDFFYQTAAALKAFCKEHGISSIFAGAQIEIDERRRDQALL
DKGFPLQLTDEHCMLPPGSVVTQGQRDQGGAMYRVFTPFARRWREIAASRSLWPIPAPAS
VATPVVFTPFAFWGDINDDPALDKWPVGQDAALEKLSRFRELGMGRYGENRDFPAIDGTS
SLSPYLALGVISPRQCLAALLEDFPDVFVNESSPARPWLNELVWREFYRHLLVAFPGLSM
AKNFNPLGDGIRWRNDETEFEAWKHGRTGYPLVDAAMRQLNQTGWMHNRLRMVVASFLTK
HLLIDWRWGERYFREQLIDGCLAANNGGWQWAAGTGCDAQPYFRIFNPMSQSEKFDPEGR
FIRKYLPELAQWPTRSLHQASGPGLFDSSGYPSPIVEHTQARVRALDVMAVMKKG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacttgtctggttcaggcaggatcttcgcaccatagataaccaggcgctgacc
cgggcgtgtgaagatgccaacgcccgtggtggcaaggtgcatgcgctctttatcgccagt
ccgggccagtggcaacggcatgacatgggtgtgcgtcagcagcgatttttactggctaat
ctcaatgcgttgggtgaagagcttgccagtatggggattccgctgtcgttgctgaaggtg
gattttttttatcaaaccgcagcggccctcaaggcgttttgtaaagaacacggtatctcc
agcatcttcgccggggcgcaaatcgagattgatgagcgcaggcgcgatcaggcacttctg
gataaaggcttcccgctgcaactgaccgatgagcactgcatgctgccccccggcagtgtg
gtcactcagggacagcgggatcagggaggcgccatgtaccgggtatttaccccatttgcc
cgtcgctggcgtgaaatagccgcttcccgctcgctttggcctattcctgcgcccgcgtct
gtggcaacgccggtggtattcacccccttcgcgttttggggagatattaacgatgatcct
gcgcttgataaatggcctgttgggcaggatgcggcattggaaaaactatcgcgttttcga
gagcttggcatgggccgctacggcgagaatcgcgacttcccggccattgacggcaccagc
agtctgtcgccctatctggcgctcggggtgatatctccccgacagtgtctggcggcgctg
ctggaagactttcccgacgtctttgtgaatgaatcctcaccggcccgtccttggctgaat
gagttggtgtggcgcgaattttaccggcatctgctggtggctttcccgggtctgagcatg
gcaaagaactttaaccccctcggtgacggcattcgctggcgcaatgatgaaacagaattt
gaggcctggaaacacggccgtaccggctatccgctggtggatgctgcaatgcgacaactt
aatcaaaccggctggatgcacaaccggctcaggatggtggttgccagctttctaaccaag
catctgcttatcgactggcgctggggtgagcgatattttcgcgagcagctcatcgatggt
tgccttgcggctaacaacggtggttggcagtgggccgccggcacaggttgtgatgcccag
ccttactttcggatctttaaccctatgagtcagtcggaaaaatttgatcccgaaggacgc
tttatccgtaagtacctaccagaattagcgcagtggccgaccaggtcattgcaccaggca
agtgggccggggctgtttgattccagcggctatccgtctccgattgttgagcacacccaa
gcccgagtcagggcgctggatgtgatggccgtgatgaagaagggttag
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