Shewanella amazonensis: Sama_0822
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Entry
Sama_0822 CDS
T00445
Name
(GenBank) fumarase
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
saz
Shewanella amazonensis
Pathway
saz00020
Citrate cycle (TCA cycle)
saz00620
Pyruvate metabolism
saz00720
Other carbon fixation pathways
saz01100
Metabolic pathways
saz01110
Biosynthesis of secondary metabolites
saz01120
Microbial metabolism in diverse environments
saz01200
Carbon metabolism
Module
saz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
saz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
saz_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sama_0822
00620 Pyruvate metabolism
Sama_0822
09102 Energy metabolism
00720 Other carbon fixation pathways
Sama_0822
Enzymes [BR:
saz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Sama_0822
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
ABL99029
UniProt:
A1S3S3
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All DBs
Position
1005145..1006518
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AA seq
457 aa
AA seq
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MDSRIETDSMGEVLVPAEALYGAQTQRALNNFAIGGQPMPRAFIETLLLIKAAAARANSQ
LGVLASDCGQAITEAALSLRQDKALMQHFPVDVFQTGSGTSSNMNANEVLARLTSESLGR
AVSANDEVNLGQSSNDVIPSCIQIASAGVLTKTLLPALTHLKSCIRTKAASVKGVVKTGR
THLMDAMPVRLSQSLETWASQLDARELQLQSQLISLWQLPQGGTAVGTGVNAAPGFPQAF
CHELNLLTGLAFQPAPHLFTGIASQDTAVALSGELKALAVTLMKIANDLRWMNSGPLAGL
GEIRLPALQPGSSIMPGKVNPVIPEAVAMACAQVIGNDACITVAGQSGNFELNVMLPVIA
DNLLSSLRLLTNAMMALADKAIDGFEVCEGRMAKELSRNPILVTALNPIVGYAKAADIAK
RAYAEGRPVLEVALEMTDIDAEELARLLDPVRLTGQT
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggatagccggattgaaacagacagcatgggtgaggtattggtgcccgccgaggcactc
tatggcgcgcaaactcagcgggcgctgaacaactttgccattggcggccagccgatgcca
agggcatttattgagacgctgttgctgataaaggccgcagcagcccgtgccaacagccaa
ctgggcgtgctggcaagtgattgcggccaggctatcaccgaggcggctttatccttacgc
caggataaggcactgatgcaacacttccccgtggatgtgtttcaaaccggctctggcacc
agcagcaacatgaatgccaatgaagtcttggctcggctcacctcagagagtcttggtcgg
gctgtcagtgccaatgatgaggtgaatcttggacaaagcagcaacgatgttattccaagt
tgtattcaaatagcttcggcaggcgtgttgaccaagaccctgctgccagcccttacgcat
cttaagtcctgcatcagaaccaaggcggcgagcgtgaagggagtcgtaaaaaccggtcga
acccatttgatggatgccatgccggtgcgcttgagtcagagtttggaaacctgggccagc
cagttggatgccagagagctgcaattacagtcgcagctcatatccctgtggcagttaccc
cagggaggcactgctgtgggaaccggcgttaatgctgcgccgggattcccacaggcgttt
tgccatgagctgaatttgcttacgggcctcgcatttcagcccgccccacatctgtttacc
ggcattgccagccaggataccgcagtggctttgtccggtgaactcaaggcactggccgtt
accttaatgaaaattgccaacgatttgcgctggatgaactcggggccactggcaggtttg
ggggaaatccgcttgcctgcgctgcagcctggttcctcgattatgcccggtaaggtcaat
ccggtaatccctgaagcggttgccatggcctgcgcccaggtgataggcaatgatgcctgc
atcactgtggctggacagtcgggtaattttgagctgaatgtgatgctgccagtgatagca
gataacttactctcatcactcaggcttttgaccaatgccatgatggcgttggctgataag
gccatagacgggtttgaggtatgtgaaggacgtatggccaaagagcttagccgcaatccg
attttagtgacagcactgaatccgattgtgggttacgcgaaagctgccgacattgccaag
agagcgtacgctgaagggcggccagtattggaggtggcgctggagatgaccgacatagac
gccgaagagttggcgaggctgcttgacccggttcgtttgacggggcagacataa
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