KEGG T00445: Sama

Shewanella amazonensis: Sama_0870

Entry

Sama_0870         CDS       T00445

Name

(GenBank) transcriptional regulator, LysR family

K03717

LysR family transcriptional regulator, transcriptional activator of nhaA

Organism

saz Shewanella amazonensis

Brite

KEGG Orthology (KO) [BR:saz00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:saz03000]
    Sama_0870
Transcription factors [BR:saz03000]
Prokaryotic type
  Helix-turn-helix
   LysR family
    Sama_0870

SSDB

Motif

Pfam:

HTH_1 LysR_substrate S1CSD-TOTE-2 HTH_30 MarR

Other DBs

NCBI-ProteinID:

ABL99077

UniProt:

A1S3X1

LinkDB

Position

1060712..1061620

AA seq 302 aa
MQHLNYNHLYYFWMVQSKGSVVKAAEALCLTPQTVTGQIRALEDRLGGALFKRVGRQLEP
TDLGELVFRYADKMFNLSYELLDILNYRKDAAMLFEVGIADALSKALSSRVLLSVLPTDG
SMRLACYEATHESLMARLREHKLDMILSDCAGESLKYPEILSKKLGECGVSFFSSKTYTK
PFPACLEEDKLLIPGKRTSLGQQLHRWFAEKNLEVRILGEFDDAAMMKAFGFFGQGIFVA
PSIYKQDILGHGMQVIGETRDVREEYHVMFAERMIQHPAVQRLLETRFDDLFSGLDSQVQ
SF

NT seq 909 nt +upstreamnt +downstreamnt
atgcagcatctgaattacaaccatctttattatttctggatggtacagagcaagggctcg
gtggtaaaagctgccgaggccctgtgcctcacaccacaaaccgttaccgggcagatccgt
gcgctggaagacaggctcggtggtgcgctgttcaaacgggttgggcgacaacttgaaccc
acggacttgggggagctggtttttcgatacgccgacaagatgttcaacttaagctatgag
cttttggacatattgaactaccgcaaagacgctgccatgttgtttgaggtgggcattgca
gatgctctgtccaaggcgctgtcgagccgggtactcctgtctgtgttgcctacagacggt
agtatgcgtctggcctgttatgaagctacccacgagagcctgatggcacgattgcgggag
cataaattggacatgatcctgtctgattgtgccggtgagtccctcaaatatccggaaatc
ctgtccaaaaagttgggagagtgcggcgtcagtttcttctcttctaaaacctacaccaag
cctttccccgcctgccttgaggaagacaagctgctcatcccgggaaagcgcaccagcctt
gggcagcagctgcatcgctggtttgctgaaaagaacctcgaagtgcgtattctcggggaa
ttcgacgatgcggccatgatgaaagccttcggctttttcggacaagggatttttgtcgcc
ccgtcgatttacaagcaggatattttaggccacggcatgcaagtgataggcgaaactcgg
gacgttcgggaggaatatcatgtgatgttcgccgagcgcatgatccagcatccagcggtt
caacgattgcttgagacacgttttgatgacctgttttcagggctcgacagtcaggttcag
agcttttaa

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