Shewanella amazonensis: Sama_0914
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Entry
Sama_0914 CDS
T00445
Name
(GenBank) OmpA/MotB
KO
K03286
OmpA-OmpF porin, OOP family
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saz02000
]
Sama_0914
Transporters [BR:
saz02000
]
Other transporters
Pores ion channels [TC:
1
]
Sama_0914
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
TSP_3
Opacity
OprF
DUF748
Motif
Other DBs
NCBI-ProteinID:
ABL99121
UniProt:
A1S415
LinkDB
All DBs
Position
complement(1104264..1105370)
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AA seq
368 aa
AA seq
DB search
MMKNSLKIALLASALPFGVMASDEGMSPWYVGGGVGINNYEPACDQKTMRSCGEDSPYAW
DVFAGYLFNDYFGVELGYRDLGRAEWTDYANNLNDVGAKGTTLGLVAFWPFASKWSLSAE
AGAMNYLVYNNKRWGSNYYSDSGIAPFVGAGIGYNFTDNLKLSAKYRRYENLDEEKWNTL
EMESNYWGLELSYRFGSKAAPVVAAPVVVAPVDSDNDGVNDDLDKCPATPADHKVDAYGC
TVYKDDVTTHNLGSLRFANNSSVINPSSYESVEKLANYMNQHPGSTVEIGGHASNVGNPD
YNMTLSEKRANAAAKLLVEKYGISANRVTAKGYGITRPVMDGNTAEAHAANRRVEAVVTG
SEKVPVLK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaactcattgaaaattgcactgctcgcgtcggccctgcctttcggcgtcatg
gcgtctgatgaaggcatgagcccctggtatgtgggtggcggtgttggtatcaacaactat
gagccagcctgtgaccaaaaaaccatgcgttcctgtggtgaagacagtccttatgcttgg
gacgtattcgctggctacctgtttaatgactactttggtgtcgagctgggttaccgtgac
ctgggccgcgccgagtggactgactacgccaacaacctgaatgacgtaggcgccaagggc
accaccctgggcttggtcgcgttctggccatttgcgagcaagtggagcctgtcggctgaa
gccggtgccatgaactacctggtgtacaacaacaaacgctggggctctaactactacagc
gacagcggtattgcgccattcgtaggtgctggtatcggttataacttcaccgataacctg
aagctgtctgccaaatatcgtcgttacgaaaatctcgacgaagagaagtggaacacgctg
gaaatggaaagcaactattggggtctggagctgagctatcgcttcggcagcaaggcagct
cctgtcgttgccgcccccgtggttgttgcacctgttgattcagataacgacggtgtaaat
gatgatctggacaagtgcccagccacacctgccgaccacaaggttgatgcatacggctgt
acagtttacaaagacgatgtgaccacccacaacctgggctcactgcgctttgccaacaac
tcgtctgttatcaatccatcttcctacgagtctgttgagaagttggcaaactacatgaac
caacacccaggttcaaccgttgaaatcggtggccacgcttccaacgtcggtaacccagac
tacaacatgaccctgtctgagaagcgcgccaatgccgcagccaagctgctggttgagaag
tatggcatcagtgccaaccgtgtgaccgccaagggttatggtatcacccgtccggtaatg
gatggcaacacagctgaggctcatgcggctaaccgccgtgttgaagcggttgtgactggt
tctgaaaaggtaccagtactcaagtaa
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integrated database retrieval system
