Shewanella amazonensis: Sama_0960
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Entry
Sama_0960 CDS
T00445
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saz03021
]
Sama_0960
03009 Ribosome biogenesis [BR:
saz03009
]
Sama_0960
Transcription machinery [BR:
saz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Sama_0960
Ribosome biogenesis [BR:
saz03009
]
Prokaryotic type
rRNA transcription factors
Sama_0960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
DUF2187
Glyoxalase_4
McpB_HAMP_2
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
ABL99167
UniProt:
A1S461
LinkDB
All DBs
Position
1159587..1161086
Genome browser
AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKAVPREKIFEALETALATATKKKYEGDIDVRVAIDRKTGDYETFR
RWMVVEDNGEALENPYREITLEAAQYENPEIQVGEFIEDEIESVVFDRITTQTAKQVIVQ
KVREAERAQVVEQFYDKEGEIITGVVKKSNRDSVIVDLGNNADGVLYKEDLIARESFRPG
DRVRALLYAVRPEARGAQLYLTRTKPEMLIELFRVEVPEIADEMIQVMGAARDPGSRAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQFVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWELNVMTVADMNAKHQAESAKVV
ALFMASLDVDEDFAQVLADEGFTSLEEVAYVPVAELLAIDGFDEDIVEALRERAKAAIST
RALASEEALDGAEPSEELLNLEGMDRHLAFVLASRGVVTLEDLAEQGIDDLIEIEELTEE
KAGALIMAARNICWFGEES
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctgctggtcgctgaggcggtttcaaacgagaaagccgttccgcgt
gaaaagattttcgaggcgttggagacagctctggccacggcaaccaagaaaaagtacgaa
ggtgatatcgacgttcgtgtagccatcgatcgcaagaccggtgactatgaaaccttccgt
cgctggatggtggtagaggataacggcgaagcgctggaaaatccttaccgtgagatcacc
ctcgaagccgcccaatatgaaaatcctgaaatccaggtgggcgagtttattgaggacgaa
atcgagtctgtggttttcgaccgtatcactacccaaactgccaagcaggttatcgtgcaa
aaagtgcgcgaagccgaacgtgctcaggttgttgaacagttttacgacaaagaaggcgaa
atcatcactggcgtggtgaagaagagcaatcgtgacagtgtcattgtggatttgggcaac
aacgccgacggcgtgctgtacaaagaagacctgattgcccgcgaatctttccgtccaggc
gatcgcgttcgcgcactgctctatgctgtgcgtcctgaggcccgcggtgctcagttgtac
ctgacccgtaccaagcctgaaatgctgattgagctcttccgtgtggaagtgcctgaaatc
gcagatgagatgatccaggtgatgggtgctgcccgtgatccaggcagccgcgccaagatt
gctgtgaagtctaacgaccgtcgcatcgatcctatcggcgcctgtgtgggtatgcgtggt
gcccgtgttcaggccgtgtccaacgaactcggtggtgagcgcgtggatatcgtgctgtgg
gacgataacccagcgcaattcgtgatcaacgccatggcgccagccgatgtggcttctatc
atcgtggatgaagataaccactctatggacatcgccgtggaagctgattctctggcccag
gctattggccgtaatggtcagaacgtgcgtttggccactcaactgaccggttgggagttg
aacgtgatgacagtggcagacatgaatgccaagcaccaggcagaaagtgccaaggtggtt
gcgctgtttatggcgtcactggatgtagatgaagattttgctcaggtgctggccgatgaa
ggcttcacctcactggaagaagtggcttatgtaccggttgccgaactcttggcaatcgat
ggcttcgacgaggacatcgttgaagcgctgcgtgagcgcgccaaagcggccatttctacc
cgtgcgttggcgtctgaagaagcgctggacggtgcagagccgagtgaagaattgctgaat
cttgaaggcatggatcgccacctcgcgtttgtacttgcaagccgtggtgtagtgacgctg
gaagatttggccgaacaaggcattgatgatttgatcgaaatagaagaattgacagaagag
aaagccggtgcgctgatcatggctgcccgtaacatctgttggtttggcgaagagtcttaa
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