Shewanella amazonensis: Sama_0981
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Entry
Sama_0981 CDS
T00445
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saz03400
]
Sama_0981
DNA repair and recombination proteins [BR:
saz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sama_0981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
GvpD_P-loop
SLFN-g3_helicase
ABC_tran
KdpD
AAA_16
AAA
RecA
zf-LYAR
Viral_helicase1
AAA_24
NTPase_1
AAA_14
DUF6549
AAA_29
cobW
Zeta_toxin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABL99188
UniProt:
A1S482
LinkDB
All DBs
Position
1186543..1187907
Genome browser
AA seq
454 aa
AA seq
DB search
MAKNKTAYVCNECGQDFPRWQGQCSACLEWNSITEVRLGAATVARSGRFSGYAGAGVSEV
KTLDQIDLNELPRIPSSFTEFDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCQLAEVM
PALYVTGEESLQQVAMRAHRLGLPTSKLKMLSETSVETLCDIALKEQPKLIVVDSIQVMH
MSDVQSSPGSVAQVRESASFLTRFAKQNGIAVIMVGHVTKDGSLAGPKVLEHCIDCSVMF
EGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEASSGSLVMVV
WEGTRPLLVELQVLVDNSALSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVFVNVV
GGVKVTETSADLTLLLAMVSSFRGEVLPRDLVAFGEVGLSGEIRPVPNGQERLVEAAKHG
FKRAIVPRANMPKKPPEGMEVIGVSKLAEALAAL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaataaaaccgcgtacgtatgcaatgagtgtggtcaggactttccccgctgg
caagggcagtgcagcgcttgcctggagtggaactccatcaccgaagtgagactgggcgcc
gccactgtggcacgcagcggacgtttcagcggatatgctggtgccggggtatctgaggtc
aaaactctcgaccaaattgatttgaatgagctgccccgaatcccaagctcctttaccgag
tttgaccgggttctgggcggaggcatagtgcccggcagcgccatcctgattggtggtcat
ccgggagcgggtaaaagtacgctgttattgcagaccctgtgtcagttagcggaggtcatg
ccggctctctatgtgaccggcgaagagtcgctgcagcaggtggccatgcgggctcatcga
ctggggctgcctacttccaaattaaagatgctctctgaaaccagtgtcgaaaccctctgt
gacattgccctgaaagaacagcccaagctgatagtggtggactccattcaggtgatgcac
atgagtgatgtgcagtcctcccccggcagtgtggcacaggtgcgtgaatcagcgtcattc
cttacccggtttgccaagcaaaacggtatcgccgtgatcatggtcggtcacgtcaccaaa
gacggcagtctcgctggccccaaggtgcttgagcactgtatcgactgctctgtgatgttt
gaaggcgactccgacagccgttatcgcaccctccgttcccataaaaaccgttttggtgcc
atcaatgagcttggcgtctttgccatgactgagcggggcctcaaagaggtggccaacccg
tcggcaattttcctctcccgtggagaagaggcttccagtggctccctggtgatggtggtc
tgggaaggtacccggccgctgctggtggagctgcaggtgctggtggataactcggcgctg
tccaatccgcggcgggtggcggtggggatggatgccaaccgtctggccatgttactggcg
gtgatgcatcgccatggcggcctgcaaatgtcggatcaggacgtgtttgtgaacgtagtg
ggtggggtaaaggtcaccgaaaccagcgccgacctgaccttattgctggccatggtgtcc
agtttccgtggcgaagtcttgccaagggatctggtggcctttggtgaggtgggactttcg
ggcgaaattcgccccgtgcccaacggtcaggagcgattggtggaagcggccaagcacggc
tttaaacgggcgattgtgccaagagccaatatgccgaaaaagccacccgaaggcatggaa
gtgattggcgtatcaaagctagctgaagccttggcagccctttaa
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