Shewanella amazonensis: Sama_1072
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Entry
Sama_1072 CDS
T00445
Name
(GenBank) recombination associated protein RdgC
KO
K03554
recombination associated protein RdgC
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saz03400
]
Sama_1072
DNA repair and recombination proteins [BR:
saz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sama_1072
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
ABL99279
UniProt:
A1S4H3
LinkDB
All DBs
Position
complement(1298478..1299461)
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AA seq
327 aa
AA seq
DB search
MNFLVCPLTGDGLHSVFCFWPSAIMWFKNLTLYRFNKPVTIDADSLEKALADFSFSPCSS
QDVSKFGFSKALGKHGSALVHSANNRHLICATKEEKILPGQVIKEALEEKVGQLEDEENR
KLTKKEKDALKDEITTSLLPRAFSRRSQIHALILPEIDMILVDSSSATKAEELLALLRKA
MGSLPVIPVSFNVPVEHTMTEWLKAGEASAPFIMQDEAELKSAAEEGGIVRFKQQVLTED
EVLAHLETGKEVHKLALHFGQSIALLLQSDASLKRLKFSEEFRAGNDDLGNDDPMARLDA
DFALMGSELVALMHALVEALGGLPKDE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaattttctggtttgcccgcttaccggagatggcttacactcggtcttttgtttctgg
ccgagtgcaattatgtggtttaaaaatctcaccctgtatcgcttcaacaagcctgtcacc
atagacgcagattcactggaaaaggccctggccgatttctccttcagcccttgttccagc
caggacgtcagtaagttcgggttttcaaaggcgcttggtaaacacggcagcgcactggtg
cacagcgccaacaaccgccatttgatctgcgccaccaaggaagaaaaaattctgcccggc
caggtcattaaagaagcgctggaagaaaaggtgggacagcttgaagatgaagaaaaccgc
aagctgaccaagaaagaaaaagatgcgttaaaagacgaaatcaccaccagcttgctgcca
cgggcgttttcccgtcgcagtcagatccatgctctgattttgcctgaaattgatatgatc
ctggtggacagctccagcgccaccaaggccgaagagctgctggcgttgctgcgtaaagcc
atgggctcattgcctgtgatacctgtgtctttcaatgtcccggttgagcacactatgacc
gaatggctcaaggctggtgaagccagtgcgccctttatcatgcaggatgaggcagagctt
aaatcggccgccgaagaaggcggtattgtgcgcttcaagcagcaggttctcaccgaagac
gaagtgctggcccatctggaaaccggcaaagaagtacacaagctggcgctgcattttggt
cagtccatcgcgctcctgctccagtccgatgccagtctcaaacgcctcaaattctctgag
gaattccgtgcaggcaatgacgatttgggcaacgatgaccccatggcccgcctcgatgcc
gattttgccctcatgggcagcgagttggtcgccctgatgcacgcactggtcgaggcactg
ggcggactgcccaaagacgagtaa
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