Shewanella amazonensis: Sama_1192
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Entry
Sama_1192 CDS
T00445
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saz02000
]
Sama_1192
Transporters [BR:
saz02000
]
Other transporters
Pores ion channels [TC:
1
]
Sama_1192
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
ABL99399
UniProt:
A1S4U3
LinkDB
All DBs
Position
complement(1459602..1462448)
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AA seq
948 aa
AA seq
DB search
MSSLRTQVATLALAVSTALWITPVCAADAEQTTKNTEEKAKQAEEAKEEDVERIAVYGIR
SSIKESMFLKQNATSVVDLVVADDIGKFPDENLAEALQRIPGITITRNGGEGQNILVRGL
GAGYNVTTLNGRKLASEYAGRDFNFDTIASELVNVLAVYKSPEARLTEGGIGAIVDIQTR
KPLDLDGFTLQASAKGIHESRTGDIHPHASFIIGDQNDDGSLGALFSAVYSKKTLRADTY
SADGFFDEDEGWGVDSAGVPVDANNNGTIDEGEIFASKIPSYMYFANAQDVRERIGSTLA
LQWRPSDDLTLSLDGLFSRYNTDGNRYQIGFVNYDESWTPGTPLFTDAQFDDLGRVVKMK
QTGDNTMVELLNISTPRQTDTWQLGLNAEWHPTDQWSVYADAAYSQAENKNKGDNRFIVA
RGFVDSIGIDYSTGNTLPDVVISPALTSDQTYGAHYSYNSGTGVKDKVNDFKLEAIYEPE
DSLVSKVHFGVNYVKQSKTQNAFGSRNPSQFSRGGFYLTRDGYDFAPGQVFTQGEFELFR
IPENVFVPANFDNFLDGENSVSPDPWPSFDYDALLAFYRSINAEAADASIVATQSKSGSY
EVSEAVTSAFVQVTLEDELWELPYMLNLGLRASHTQVDSSGFGYDLSKVVLDSAGNPTNN
DWRAVLPVGHEGSYSNVLPSLNFRLNLQDDLLLRVSAAQTLSRPSLYALRTWANPDFVNR
KEGLPTLSRGNPGVSAEEAYQGDVTLEWYYGDSSSLAAGVFVKDIQSFIENDENAMDVEG
NRYMVNQPESGEYGALITGYEVAWQQSLEQWLPSPLDGFGVQLNYTYVDSEYDDPARKEQ
NLPFAGMSENSYNAVLYYEKYGLQGRFAYNWRSKFLVDPEAWGGPAWINAYGQLDASLSY
ALLENLNVFVEASNLGNDRYSGYIKRPDQVNYLERFGTQIAFGVRGSF
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttacgtacccaagtcgccaccctggcgctggcggtcagcaccgcactctgg
ataacacctgtgtgcgcggccgatgccgaacaaacaaccaagaacaccgaggaaaaagcc
aagcaagccgaagaagccaaggaagaggatgttgagcgtattgcggtttacggtatccgc
tccagtatcaaggagtcgatgttcctcaagcaaaacgccaccagcgtggtggatttggtg
gtggccgatgacataggcaagttccccgatgaaaacctggccgaagcgctgcagcgtatt
cccgggatcaccatcacccgtaacggcggtgaaggacaaaacattctggtgcgcggcctg
ggcgcaggttataacgtcaccaccctcaacggccgtaaactggcttcagaatatgcgggc
cgtgacttcaactttgataccatcgcctcggagctggtgaatgtgctggcggtatacaag
tcgcccgaagcccgtctcaccgagggtggaatcggcgcaatagtcgatattcaaacccgt
aagccgctggatttggatggttttaccctgcaggcttccgccaaggggatccacgagtca
cgcacaggtgacatccatccccatgcatcattcatcattggcgatcagaatgatgacggc
agtctgggcgcactcttctctgccgtatattcgaaaaagaccctgagggccgatacctat
tctgccgacggatttttcgatgaagacgaaggctggggtgtggacagtgccggggtgccc
gtggatgccaacaacaatggcaccattgatgagggcgaaatcttcgcctctaaaattccc
agctatatgtactttgccaacgcccaggacgtccgtgagcgcatcggctctaccctcgcc
ctgcaatggcgcccaagcgatgacttgaccctgagtctggatggtctcttttcccgctac
aacacagatggtaaccgctaccagattggctttgtaaactacgacgagtcctggacaccg
ggcacgccgctgtttaccgatgcccagttcgacgacctgggccgagtggtcaagatgaag
caaaccggtgataacaccatggtggagctgctgaacatctctaccccgcgccagaccgat
acctggcagctgggcctgaatgccgagtggcaccctaccgaccaatggtctgtatacgcc
gatgcggcttattctcaggcggaaaacaagaacaagggtgacaaccgcttcatagtggca
cgtggttttgtcgatagcatcggcatcgactacagcacaggtaataccctgccggatgtg
gtgataagcccggccctgacctctgaccaaacctacggtgcccactacagctacaacagc
ggtaccggggtaaaagacaaggtgaatgacttcaaactcgaagccatttatgaacccgaa
gacagcctggtaagcaaggtgcactttggggtgaattatgtcaaacagtccaagacccag
aacgcctttggatcccgtaaccccagccagttcagccgcggcggtttttacctgacccgc
gatggttacgactttgccccaggccaggtatttacccagggcgaatttgaactgttccgc
attccggaaaacgtgtttgtgcccgccaacttcgataacttcctcgacggggaaaacagc
gtatcgccagacccctggccaagctttgactatgatgccctgctggccttctaccgctcc
atcaatgccgaggccgccgacgccagcatagtcgcgacccaaagcaagtccggcagctac
gaagtatctgaagccgtgacctcggccttcgtgcaggtcaccctggaagatgagctgtgg
gaactgccctacatgctgaacctcggcctgcgtgccagccacacccaggtagactccagc
ggttttggttatgacctgtccaaggtggtgctcgacagcgccggtaaccccactaataac
gactggcgtgctgtcctgcctgtgggtcatgaaggcagttacagcaacgtgctgccgagc
ctgaacttccgcctgaacctgcaggacgatttgctgctgcgcgtctctgccgcccaaacc
ctgagccgtccatccctgtatgccctgcgtacctgggccaatcccgacttcgtcaaccgc
aaagaaggattgccgaccctgagccgtggtaatcccggcgtaagtgccgaagaggcctat
cagggcgatgtgacgctggagtggtactacggtgacagcagctcactggctgccggcgtg
tttgtgaaggatattcaatcctttatcgaaaacgatgaaaacgccatggacgtggaaggc
aaccgctatatggtcaaccagcctgagtcaggcgagtatggcgcccttatcacaggttac
gaagtggcctggcagcagtcgctggagcaatggctgccgtcacccctggatggttttggc
gtgcagctgaactacacctatgtggacagcgaatatgacgacccggctcgcaaagagcag
aacctgcccttcgccggcatgtctgaaaactcctacaacgcggtgctctactacgagaaa
tacggtttgcagggccgcttcgcctacaactggcgcagcaagttcctcgttgacccggaa
gcctggggtggtcctgcctggatcaacgcttacggccagctggatgccagcttaagctat
gcgctgctggaaaacctgaatgtgtttgttgaagcctccaacctcggcaatgaccgctac
tctggctacatcaagcgccctgatcaggtgaactacctggagcgcttcggtacacagatt
gccttcggtgtcaggggcagtttctaa
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