KEGG   Shewanella amazonensis: Sama_1227
Entry
Sama_1227         CDS       T00445                                 
Name
(GenBank) DNA-binding protein, HU family
  KO
K03530  DNA-binding protein HU-beta
Organism
saz  Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:saz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:saz03032]
    Sama_1227
   03036 Chromosome and associated proteins [BR:saz03036]
    Sama_1227
   03400 DNA repair and recombination proteins [BR:saz03400]
    Sama_1227
DNA replication proteins [BR:saz03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Sama_1227
Chromosome and associated proteins [BR:saz03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Sama_1227
DNA repair and recombination proteins [BR:saz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Sama_1227
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 Peptidase_M35 NTPase_P4
Other DBs
NCBI-ProteinID: ABL99434
UniProt: A1S4X8
LinkDB
Position
1511088..1511360
AA seq 90 aa
MNKSELIEKIASGADISKAAAGRALDSFIAAVTEGLKDGGKISLVGFGTFEVRERAERTG
RNPQSGKEIKIPAAKIPAFKAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaatctgaactgatcgagaaaattgcttctggtgccgatatttccaaggctgct
gccggtcgcgcactggactctttcatcgctgctgtgactgaaggtctgaaggacggcggt
aaaatttccctggttggttttggtacttttgaagttcgtgagcgtgctgagcgtaccggc
cgtaacccacagtctggcaaagagatcaaaatccctgctgccaagatcccagcattcaaa
gctggtaaagctctgaaagacgcagtcaactaa

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