Shewanella amazonensis: Sama_1227
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Entry
Sama_1227 CDS
T00445
Name
(GenBank) DNA-binding protein, HU family
KO
K03530
DNA-binding protein HU-beta
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saz03032
]
Sama_1227
03036 Chromosome and associated proteins [BR:
saz03036
]
Sama_1227
03400 DNA repair and recombination proteins [BR:
saz03400
]
Sama_1227
DNA replication proteins [BR:
saz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sama_1227
Chromosome and associated proteins [BR:
saz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Sama_1227
DNA repair and recombination proteins [BR:
saz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Sama_1227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Peptidase_M35
NTPase_P4
Motif
Other DBs
NCBI-ProteinID:
ABL99434
UniProt:
A1S4X8
LinkDB
All DBs
Position
1511088..1511360
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKIASGADISKAAAGRALDSFIAAVTEGLKDGGKISLVGFGTFEVRERAERTG
RNPQSGKEIKIPAAKIPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctgaactgatcgagaaaattgcttctggtgccgatatttccaaggctgct
gccggtcgcgcactggactctttcatcgctgctgtgactgaaggtctgaaggacggcggt
aaaatttccctggttggttttggtacttttgaagttcgtgagcgtgctgagcgtaccggc
cgtaacccacagtctggcaaagagatcaaaatccctgctgccaagatcccagcattcaaa
gctggtaaagctctgaaagacgcagtcaactaa
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