Shewanella amazonensis: Sama_1252
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Entry
Sama_1252 CDS
T00445
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saz02000
]
Sama_1252
Transporters [BR:
saz02000
]
Other transporters
Pores ion channels [TC:
1
]
Sama_1252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABL99459
UniProt:
A1S503
LinkDB
All DBs
Position
1537855..1540578
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AA seq
907 aa
AA seq
DB search
MLKNSMLAKSVRFALVAGATTAAFTAPTVYAADEGEKVERIEVTGSRIKRTDLETASPIT
MFSAEDIANSGVATLEDFVQNIPAINGGAEGSSVNNGSRGFATASLRGLGSGRTLVLING
RRFASGDLNSIPTAYVERIEVLRDGASTVYGSDAIAGVINFITKKDFEGIEFGAQYDIAS
EGDGEKTLLSVTTGTSSDRGNVVMSLQYTKREAIWQGDRDFSACPIFERGGEKVCGGSGT
IPYGQFFYTGANSPAGGHVIDPSTGAIRKFDQAVDGYNYAVASYMVTPQEVFSINGAGRY
EISDTLTGFMEGGFTNRQSDQLMAPEGTFWGPTMPASNPYNPTGEDLIVVRRLAETGGRG
FTQDFSDYRMVFGLEGSLGDYYWDLSYNFARYVDSRLDLGRVNPTRAETLLDPDLCAKDS
DCPGIWNPLAEGTLTPEMLAYAFVPNSPVVRGETRQLQGNISGSLFGLELPGGEVMFAAG
FEKRWDEYQSVPDGAASIGQIYSVAGEPTSGDYSVNEAYAEFDMPVLEGLPFAESVRVTA
AVRYSDFDFLDDGSTNTKFGLEWVPFDGLMLRSTLADGFRAPSVSELYAPQSETNLAYAE
PCKNYATGTQNATVKANCAAEGLPGNFELSSNQSSTVVGGNPDLQPEESESFTAGFVYSH
DIGFSASVDYFNIEITNGIGTAGTDNVVSACWNSANFSSPLCDLIKGPSLTGDAPHPTSP
YRTALGPVAGILLTNANLSTFETSGYDFDLSYKTDIGEGQFSALLNGTYLEQYDYLPYEG
ADIVSAAGKVAADQWETTLAVFPRLRANLSLNYTMDNWSVSWQTRYQSEGEDYFASEDNL
DNIADSIWYHDVQGTYFAMDNLSLTVGVRNLFDEEAPYISNNQDMNTIPVSYDTAGQYWY
ARVNVKF
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagaacagcatgctggcaaaatctgtgcgttttgccttagtagcaggtgcgacg
actgcagcgtttaccgcgccaactgtatatgcagctgacgagggcgaaaaagtcgagcgt
atcgaagtaactggctctcgtatcaagcgtactgaccttgaaactgccagcccgatcacc
atgttttctgctgaagacatcgcgaactcaggtgtagctaccctcgaagacttcgtacaa
aacattcctgccatcaacggtggcgccgaaggttcttctgtaaacaacggtagccgcggc
tttgcgactgcttctctgcgtggtctgggttcaggccgtactctggttctgatcaacggt
cgtcgtttcgcttctggcgatttgaactctattcctactgcttacgttgagcgtatcgaa
gttctgcgtgacggtgcttccaccgtttacggttctgacgctatcgccggtgtaatcaac
ttcatcaccaagaaagattttgaaggtattgagttcggtgctcagtacgatatcgccagt
gaaggcgacggtgagaagactctgctgtctgtgaccactggtacttccagcgatcgcggc
aacgtggttatgtctctgcaatacaccaagcgtgaagcgatttggcagggcgatcgtgat
ttctctgcttgcccaatatttgaacgtggtggtgagaaagtttgtggtggttcaggtacc
atcccttacggtcaattcttctatactggcgctaacagcccagccggcggtcacgtaatt
gacccatcaactggtgcaattcgtaagtttgaccaagcggttgatggttacaactatgcc
gttgccagctacatggtgacccctcaggaagtgttcagcatcaacggtgctggccgctac
gaaatcagcgataccctgaccggtttcatggaaggtggtttcaccaaccgtcagtctgac
cagttgatggcaccagaaggtaccttctggggaccaaccatgccagcctcaaacccatac
aacccaaccggtgaagacctgattgtggtgcgtcgtctggcagagaccggcggtcgtggt
tttactcaggacttctccgactaccgcatggtatttggtctggaaggttctctgggcgat
tactactgggatctgtcatacaacttcgcacgttatgttgactcacgcctggacttgggc
cgtgtaaacccgactcgtgccgaaaccctgcttgacccggatctgtgtgctaaagattca
gattgcccaggtatctggaacccactggccgaaggtactctgacgccagaaatgctggct
tacgccttcgtacctaactcgccagtggttcgcggtgagacccgtcagctgcagggtaac
atctccggtagcctgttcggtctggaactgccaggtggtgaagtcatgttcgctgccggt
tttgagaagcgttgggatgaataccagagcgtaccagatggtgcggcttctatcggccag
atctactctgtagctggtgagccaacttccggtgactactctgtaaacgaagcttacgct
gaattcgatatgccagtcctcgaaggcctgccattcgccgagtctgtacgcgtaactgct
gccgtacgttactctgacttcgacttcctggatgatggttctaccaacaccaagttcggt
ctggagtgggtaccattcgacggtctgatgctgcgttctactctggctgacggtttccgt
gcaccaagcgtgagcgaactgtatgctcctcagtctgaaaccaacctggcctacgcagag
ccttgtaagaactacgctaccggtactcagaacgcgaccgttaaagccaactgtgctgcc
gaaggtctgccaggaaactttgaactgtcttctaaccagtcttctactgtagtgggtggt
aacccagatctgcagccagaagagtctgaaagctttactgccggtttcgtatacagccac
gacatcggtttcagcgccagtgttgattacttcaacatcgaaatcaccaacggtatcggt
actgccggtactgacaacgtggttagcgcttgctggaactcagccaacttctcaagccca
ctgtgtgacctgatcaaaggcccaagcttgactggtgatgctccacacccaacttctcca
taccgtactgcgctcggtccagttgcaggtatcctgctgaccaacgccaacctgtctacc
ttcgagacttcaggttatgactttgacctgtcttacaagactgacatcggtgaaggccag
ttctctgcactgctgaacggtacttacctggagcagtatgactacctgccatacgagggt
gctgacatcgtttctgccgccggtaaagtggctgctgaccagtgggaaaccaccctggct
gtgttcccaagactgcgtgccaacctgtctttgaactacaccatggataactggtctgta
agctggcagacccgctaccagtctgaaggtgaagactacttcgccagcgaagacaacctg
gacaacattgctgattccatctggtatcacgatgtacagggtacttacttcgctatggac
aacctgtctctgactgtgggtgtgcgtaacctgttcgatgaagaagctccatacatctcc
aacaaccaggatatgaacaccatcccagtgtcttacgacactgccggtcagtactggtac
gctcgcgtaaatgttaagttctaa
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