Shewanella amazonensis: Sama_1303
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Entry
Sama_1303 CDS
T00445
Name
(GenBank) NifR3/Smm1 family protein
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saz03016
]
Sama_1303
Transfer RNA biogenesis [BR:
saz03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Sama_1303
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
FMN_dh
NAGLU_C
BKACE
Motif
Other DBs
NCBI-ProteinID:
ABL99510
UniProt:
A1S554
LinkDB
All DBs
Position
complement(1587305..1588273)
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AA seq
322 aa
AA seq
DB search
MRDISLRIILAPMEGVLDHLMRELLSSINPYDLLVTEFVRVVDQLLPEKVYYRLCPELKN
NGLTKSGTPVRVQILGQEPGWMAENALRAVTLGSRGVDANFGCPAKMVNRSKGGAVLLQY
PELIHDIVKAMRQAVPSEQPVTAKIRLGYEDKSLFMENALAVYEAGATELAIHARSKVDG
YKPPAYWEYITEVRERLPIPVIANGEIWNRDDALRCMEVTGCDSIMIGRGALSMPNLAAS
IKGDTPYDWATTLRLMIHYSELETSGLKATYYPARIKQWFSYLSREYPEADDLFREIRIH
KTTEDILNGLKLAATKLAPMKS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcgggatatcagcttgcggattattttggcccctatggagggcgtgctggatcatttg
atgagggagctgctctcatccatcaacccctacgatctcctggttaccgagtttgtgcgc
gtggtggatcagctattaccggaaaaggtctactatcgcctctgtcctgagctgaaaaac
aacggcctgaccaagagtggtaccccggttcgggttcagatattgggtcaggaacccggt
tggatggctgaaaacgcgctgcgggcggtgacactgggctcccgaggtgtagatgccaac
tttggctgcccggccaaaatggttaaccgcagcaagggtggtgccgtgctgctgcaatat
cccgaattaattcacgatattgtcaaagccatgcgtcaggctgtgcccagcgagcagccg
gtcaccgccaaaattcgtttagggtacgaagacaaatctctgtttatggaaaacgccctg
gccgtatacgaggccggcgccaccgagcttgccattcatgcccgcagcaaggtagacggt
tacaaaccgcccgcctattgggagtacattaccgaggtgcgtgagcgcttgcccattccg
gtcatcgccaacggcgaaatctggaaccgtgacgatgccctgcgctgcatggaagtaacg
ggctgcgacagcatcatgattggtcggggtgccttgtcaatgccaaacctggctgccagc
attaagggtgacacaccctatgattgggccacaacgctgagattgatgatccactactca
gagctggaaacctcaggactgaaggccacttattatccggcacgtatcaaacagtggttc
agttacctgagcagggaatatccggaagcggacgacctgttcagggaaatacgaattcac
aaaaccaccgaggacatactgaatggcctcaaactggcagccaccaagctggcgccaatg
aagtcataa
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