Shewanella amazonensis: Sama_1320
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Entry
Sama_1320 CDS
T00445
Name
(GenBank) Ig-like, group 1
Organism
saz
Shewanella amazonensis
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Gene cluster
GFIT
Motif
Pfam:
Big_1
Invasin_D3
Beta-sand_DEX1
Glyco_hydro2_C5
MG4
AMT4_dom_C
Motif
Other DBs
NCBI-ProteinID:
ABL99527
UniProt:
A1S571
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Position
1604790..1607255
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AA seq
821 aa
AA seq
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MKSAFKLWLATFLSFLLIACGGGGSISDTGGGDGGTPPTDTITVTAAITFSSSNSTIGID
TPATVTANVKGSLSGAKAGKLVTFKLNNASLGTFTPSTGTALTDAEGNATITLSTADIAG
AGTVTASVDTGESSDPVGFTMKGDGGSSTGGEAQVSLTLTDADGAPTDTISSTKPGKLVA
TVSGISKTVIVTFNSSLGDLPIKTAITDANGKASVDIYAGSQPGAAEATATLSTGESGQK
VFVIGASNVLMGTAEGDFVAGKASVSASAISAGGTATVSVKLQDDQGILFTEPVSVSFSS
TCATKGQAELSSPITAVGGIATSTYLAKGCVGDDNISVSADVGGKNLSATGTLNVLAADA
GSIVFVGATPENISIKGTGGDESSTVKFKVLDTNGNPVANKAVSFTLNTSVGGLTLSPAT
ATTNSQGIAQTVVTSGAVATTVRVTASIDGTNPVISSQSSVLVISTGKPDQDSFSLSAEV
LNAEGWDIDGTEVKVTARLADAFNNPVPDGTAVYFTTEGGSIDPSCTTANGACTVVWRSQ
NARPGGVTLIDGSGAMVRNPTPVLVEDGGRYYGFYGQKFGGRATITATAVGEESFPDTNG
NGRFDAAEMDAFLNGTDVSGDSYDLADAFVDHNEDGIFNPQQAGGQTGGENEELVDFDED
GQFDAADSKYNGVLCSVPAHAGCASVDAQSLFVRRSLVLVMSGSEAFATAADDVVIDDRD
GVSTGGSIDINGKSTASVVFAISDLHNQQMPAGTKVQFATSTGSIASTASYTWPSSNYNG
ARQFSVTVKGADQPESGVFSVTVTTPGGTATEVLTVPVNIY
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagcgtttaagttatggttggccaccttcctctcgtttttattaatagcctgc
gggggcggtggttcgatttcagatacagggggaggggatggtggtacgcctccaacagac
acaattacggtcacagctgctataacatttagctcttccaacagcaccattggcatagat
actccggccacagtgacagcaaatgttaaaggatcgctttctggtgcaaaagctggaaaa
ttggtcacctttaaactgaataacgcatctttaggcacttttaccccatccacaggaaca
gccctgaccgatgcagagggtaatgccactattacgctgagtacggcagatattgccgga
gcaggaacagtcactgcgagtgtcgacaccggtgagtccagcgaccctgttggttttacc
atgaaaggtgacggcggaagctcaaccggtggtgaagcccaggtgagcttgacgcttacc
gatgcagatggtgccccaaccgataccatttcgagcaccaagcccggcaagttggttgcc
actgtttcaggtatttccaagacagtcattgttacattcaactcttcccttggcgatttg
ccgattaaaaccgcgattacagatgcaaacggcaaggccagtgtcgatatttatgcaggc
agtcaacctggtgctgccgaggctacagcgactctttcaaccggtgaaagcggccagaaa
gtgtttgtgattggcgccagcaatgtgctgatgggaactgctgaaggcgactttgttgcg
ggtaaggcctctgtgagcgccagtgctatttctgcaggcggtactgcgacggtttctgtc
aagcttcaagatgaccagggtatcctctttaccgaacctgtcagtgtcagcttctcgtca
acctgtgcgaccaaggggcaagctgagctaagtagcccaattactgccgttggtggtatc
gcgaccagcacttatttggctaaaggttgtgtgggtgatgacaatatcagtgtctcagca
gatgtaggtggcaagaacctgtcagcgactggcacattgaatgtgcttgcagcagatgct
ggcagtattgtctttgtcggagcaactcctgaaaatatcagtatcaagggcacgggtggt
gatgagtcatccactgtgaagttcaaggtactagataccaatggcaacccggtggccaac
aaggctgtgtctttcacgttaaacacctccgtggggggcctgacgctaagcccagccaca
gccactaccaatagccagggcattgcccaaacagtggtaacttccggtgcagtggcaact
acggtgcgagttactgcatcgattgacggcaccaacccggttatttcgagccaatccagc
gtgctggtgatttctaccggtaagcccgatcaggacagcttctctttatctgccgaagta
ttgaatgctgaaggctgggatattgatggcaccgaagtgaaggtgacagcgcgtcttgcg
gatgcctttaacaacccagtgccagatggaacggcggtttatttcaccactgaaggtggt
tcaatagacccgtcctgtaccactgctaatggagcctgtactgtcgtatggcgcagtcaa
aatgccaggcctggcggcgtgacgcttatcgacggttcgggcgccatggttcgtaaccca
acgcctgtgttggtagaagatggtggtcgctattacggcttctatggccagaagtttggc
ggccgcgcaaccattaccgccaccgctgtaggtgaagagtccttccctgataccaacggt
aacggccgatttgatgctgcggaaatggatgccttcttaaatggaaccgatgttagcggc
gacagctacgatttggctgatgcctttgtcgaccataacgaagatggcatattcaaccct
cagcaagcgggtggtcaaaccggtggcgaaaatgaagagctcgttgattttgacgaagac
gggcaatttgatgctgcagatagcaaatacaatggcgtgctgtgctcagtgcctgcccat
gccggctgcgcaagtgtcgatgctcagtcactcttcgtcagacgcagtctggtgctggtg
atgtcaggcagtgaggcttttgcgactgcagcagacgatgtggtgattgacgaccgtgat
ggtgtgtcaaccggcggcagcatcgacattaacggtaaatcgactgcgtctgtggtcttt
gccatctctgatttgcacaatcagcagatgcctgcaggaactaaagttcaattcgctaca
tcgacgggttcgattgccagtaccgccagctacacctggcccagcagtaactacaatggt
gcgagacaattctccgtgaccgtgaagggggcagaccaacctgagagcggcgtgttctct
gtgactgttaccaccccaggcggtacggccaccgaggtactgacagtccctgtaaacatc
tattga
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