Shewanella amazonensis: Sama_1337
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Entry
Sama_1337 CDS
T00445
Name
(GenBank) ABC transporter, ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
saz
Shewanella amazonensis
Pathway
saz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sama_1337
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saz02000
]
Sama_1337
Enzymes [BR:
saz01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Sama_1337
Transporters [BR:
saz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Sama_1337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
APS_kinase
AAA_29
PCF11_RFEG_rpt
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_24
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABL99544
UniProt:
A1S588
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All DBs
Position
1629732..1631531
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AA seq
599 aa
AA seq
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MTTAHNQEVWTVFKRLMGYLKPMKSIFIVSVIALLVYGAVDATFIAFIQPFIDKGFSGVG
MSGSVNMGTTSGFDSGNSVLFWAPFVVVGLFTLRGLANFVSTYGISYMSAKLIMDMRQQV
FEHYLTLPVSYIDKENSGNLISRVTFDTEQIARASGSALISIVRDGVTVIGMLGLMFYNS
WKLSLCILIVGPIIGLVIATVSRRFRKISRQIQSAMGGVTAVTEQMIKGHKNVLAFGGQE
TEAKRFAQVNDHNRHQNMKLAVAQAISQPTIMIIGSFALAFVLYAASFDALKSELTAGTF
ATVLAAMMATLQPIKNLTRVNAEFQRGIAACTTVFELLDTPAEHDKGTFETERVKGHVRF
EQVAFRYEGQEGRALDGISFDVPPGKTLALVGRSGSGKSTIASLINRFYGGLEQGAIELD
GVNVEDYRLKNLRSQVALVSQQVTLFNDTIANNIAYACPWAVTREQIEQAATLAHAMEFI
SKLPSGLDTQVGENGVLLSGGQRQRIAIARAMLRNAPVLILDEATSALDTESEKAIQEGL
ENLRQNRTSIVIAHRLSTIESADEILVIEQGRIVERGNHKSLLAQDGMYAKLYQMQFTG
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgactacagctcataatcaggaagtttggactgtgttcaaacgcctcatggggtacctc
aaacccatgaagtccatctttatcgtctcggttattgcacttttggtctatggtgcagta
gacgcaacctttattgcttttatccaaccctttattgataaaggcttttccggtgttggt
atgtcgggaagtgtcaatatgggtactacatccggatttgattccggcaacagcgtactc
ttttgggcaccctttgttgtcgtggggctgtttaccctgaggggcctggccaactttgtc
tccacctatggtatctcctacatgagtgccaagctcatcatggacatgcgccagcaggtg
tttgagcattatctgaccctgccggtgagttacatcgacaaggaaaattcaggtaacctt
atttcccgcgtcaccttcgataccgaacaaatcgccagggcgtccggcagcgcgctgatt
tccatcgtccgtgatggcgtgaccgtcatcggcatgctggggctcatgttttacaactcc
tggaagctgtcgctctgcatcctgattgtgggcccaatcataggattggtgatagctacg
gtcagccgccgtttccgtaagatttcccgccaaattcaaagtgccatgggcggcgtcact
gcggtgaccgagcagatgatcaagggccataaaaacgtgctcgcttttggcggtcaggag
accgaggccaagcgttttgcccaggttaacgaccacaatcgccaccagaatatgaagctt
gccgtggctcaggccatcagccagcccactatcatgattatcggctcttttgcgctggcc
tttgtgctctatgccgccagttttgatgccctgaagagtgagctgaccgcaggtaccttc
gccactgtgcttgccgccatgatggcaaccttgcagcccatcaagaacctgacccgcgtt
aacgccgaattccagcgcggtatcgccgcctgtaccacggtatttgagctgctcgataca
cccgccgaacatgacaagggcacatttgaaaccgagagagtcaaggggcatgtccgtttt
gagcaggtggcatttcgctacgaaggccaggagggcagagccctcgacggtatcagcttt
gatgtgccgccgggtaaaaccctggcgctggtggggcgttccggctcgggcaaatcaacc
attgccagccttatcaatcgcttttatggcggactcgaacagggggctatcgagctcgat
ggcgtcaatgttgaggactatcgccttaaaaacctgcgcagccaggtggcgctggtcagt
cagcaggtcaccctgtttaacgacaccattgccaacaatatcgcctatgcctgcccatgg
gcggtgacccgcgagcaaatagagcaagcggccacactggcccacgccatggaatttatc
agtaagctgcccagcggcctcgatacccaggtaggcgaaaacggcgtgctgctttccggt
ggtcagcgccagcgtatcgccattgcccgcgccatgctgcgtaatgctcccgtactcatc
ctcgatgaggccacctcggcactggacacagagtctgagaaggccattcaggaaggactt
gagaacctgcgacaaaaccgcacttccatcgtgattgctcaccgcctgtccaccatcgaa
agtgccgatgagattttggtgatagagcagggacgtattgtggagcgcggcaaccacaag
tcactgttggcgcaggatggtatgtacgccaaactctatcaaatgcagtttaccggctga
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