Shewanella amazonensis: Sama_1425
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Entry
Sama_1425 CDS
T00445
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
saz
Shewanella amazonensis
Pathway
saz00020
Citrate cycle (TCA cycle)
saz00190
Oxidative phosphorylation
saz00650
Butanoate metabolism
saz00720
Other carbon fixation pathways
saz01100
Metabolic pathways
saz01110
Biosynthesis of secondary metabolites
saz01120
Microbial metabolism in diverse environments
saz01200
Carbon metabolism
Module
saz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
saz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
saz_M00149
Succinate dehydrogenase, prokaryotes
saz_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sama_1425
00650 Butanoate metabolism
Sama_1425
09102 Energy metabolism
00190 Oxidative phosphorylation
Sama_1425
00720 Other carbon fixation pathways
Sama_1425
Enzymes [BR:
saz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Sama_1425
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
DAO
Pyr_redox_2
FAD_binding_3
FAD_oxidored
Thi4
Motif
Other DBs
NCBI-ProteinID:
ABL99632
UniProt:
A1S5H6
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All DBs
Position
1733843..1735609
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AA seq
588 aa
AA seq
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MSIPVREFDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDNWEYHMYDTVKGSDFIGDQDAIEYMCQTGPEAIIELEHMGLPFSRFENGKIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHCLYQQNVKNKTQVFSEWYALDLVKNEDGAIVGC
TAIDIESGEIVYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMAYRAGVQLQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG
RGCDGPMGPHIKLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVIPTCHYMMGGL
PTKVSGQVIRKNDDGSETDIVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG
KALDETADPKAATDADIEQSLARLKRWESNKDGEDPAQIRKDLQMCMQLNFSVFRTGEAM
AEGLEQLQAIRKRLENAKLSDNSKEFNTQRIECLELDNLMATAIATAYAANFRTESRGAH
SREDFTERDDDNWLCHSLFDPVTEAMSKREVNMSPKHREAFPPKKRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattccagttcgcgagtttgatgcagtcgtgattggtgccggcggtgccggtatg
cgcgctgcactgcagatttccaaagaaggcaagagctgtgcgctcctgtctaaagtattc
ccaacccgttctcacactgtatctgcccagggtggtattacagtagcgctgggcaacgcc
cacgaagataactgggaataccacatgtacgataccgttaagggctccgactttatcggt
gaccaagacgctatcgaatacatgtgtcaaaccggtccagaagccattatcgagctggag
catatgggtctgccattctcccgtttcgaaaacggcaagatttaccagcgtccttttggc
ggtcagtccaagaactttggtggtgagcaggctgctcgtactgccgcggctgccgaccgt
accggtcacgccctgctgcactgtctgtatcagcagaacgtgaagaacaaaactcaggta
ttctctgagtggtacgctcttgacctggtgaagaacgaagatggcgccatcgtaggctgt
actgccatcgacattgaatccggtgaaattgtttacttcaaagccaaggccactgtactg
gctaccggtggtgcaggtcgtatctacgcatctaccaccaacgcgcacatcaacaccggt
gacggtgtgggtatggcttaccgtgccggtgtgcagctgcaggacatggaaatgtggcag
ttccacccaaccggtattgccggtgccggtgtactggtaaccgaaggttgccgcggtgag
ggtggctaccttttgaacaaagacggtgagcgctttatggagcgttacgcgccaaacgcc
aaggacctcgcgtcccgtgacgttgtggcccgttccatgatgaccgaaatccgtgaaggc
cgtggctgtgatggtcctatgggtccacacatcaagctcaagcttgatcacctgggtaaa
gaaaccctggaagcccgtctgccaggcgtgtgcgaactgtcacgtacctttgctcacatc
gatccggccgatggcccaatccctgtgatcccaacctgccactatatgatgggtggtctg
ccgaccaaggtatccggtcaggtaatccgtaagaacgacgacggcagcgaaaccgatatc
gtcggcctgttcgctgtgggcgaaatcgcttgtgtatctgttcacggtgccaaccgtctg
ggcggtaactcgctgcttgacctggtggtattcggccgtgcggctggtcagcacctgggt
aaggcgctggacgagactgccgatcctaaagctgctaccgacgcagacatcgagcaatca
cttgcccgtctgaagcgttgggaaagcaacaaagacggcgaagatcctgcgcaaatccgt
aaagacctgcaaatgtgtatgcagcttaacttctctgtgttccgtaccggtgaagccatg
gccgaaggcctcgagcaactgcaagccatccgcaagcgtctggaaaatgccaagctgtct
gacaactccaaagagttcaacactcagcgtattgagtgtctggagctggataacctgatg
gccaccgccatcgcgactgcttacgctgctaacttccgtactgagagccgtggtgcccac
agccgtgaagacttcaccgagcgtgatgatgacaactggctgtgccacagcctgttcgac
cccgtgactgaggctatgtccaagcgcgaagtgaacatgtcacccaagcaccgtgaagcc
ttcccaccgaagaagcgtacctactaa
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