Shewanella amazonensis: Sama_1517
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Entry
Sama_1517 CDS
T00445
Name
(GenBank) Microbial collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
saz01002
]
Sama_1517
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
saz02042
]
Sama_1517
Enzymes [BR:
saz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
Sama_1517
Peptidases and inhibitors [BR:
saz01002
]
Metallo peptidases
Family M9
Sama_1517
Bacterial toxins [BR:
saz02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
Sama_1517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
ABL99724
UniProt:
A1S5R8
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All DBs
Position
1846415..1847356
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AA seq
313 aa
AA seq
DB search
MYPPKSLITVSLLLALISAVSHAKGRPGTNPTEPADPDVVLPIRVDCSATINLWAQDMTD
PQIADTCAQLSSQESDFHQRMQTFGEPVANDYNDSLRVVVFDDYSQYDKYGYELFNISTN
NGGIYIEGNPADVNNQASFYAHEADWLLPEFEIWNLRHEYIHYLEGRFVSYGGFNFYPSK
MVWWAEGLAEYLSLGSDNATAVNLALNTRANRRPTLAAIFSTSYRDGTDRVYRWSYLAIR
FLFERHEAEVLAMTEHLKHNQFASYEAALGQFATNYQAEFAEWMNGLAPQKAKAQDSKRE
QMLLRHAEHKGRQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtacccacccaagtcccttatcaccgtcagtttgctgctggcactcatcagtgcggtt
tcccacgccaagggtcgccccggtaccaaccccaccgagcctgccgatcccgatgtggta
ttgcctatccgtgtggattgcagcgccactatcaatttgtgggcgcaggacatgacagac
ccgcaaattgccgatacctgtgcgcagctctcaagccaggaaagtgattttcaccaaaga
atgcaaacctttggtgagcctgtggcaaacgactacaacgacagcctgcgggtggtggtg
tttgatgattactcccaatatgacaaatacggctatgagcttttcaatatcagcaccaac
aacggcggcatttacattgaaggcaatccggcggatgtaaacaaccaggcgagtttctac
gcccacgaagccgactggctacttcccgagtttgaaatttggaatctgcgccacgagtat
atccattacctggaagggcgctttgtcagctatggcggctttaatttctacccgagtaag
atggtgtggtgggctgagggccttgcggagtacctttcccttggcagcgacaatgccaca
gcggtgaatctggcacttaacacccgcgccaatcgtcgcccgaccctggcggcaattttt
tcaaccagttaccgggatggcaccgacagggtttaccgctggagttatctggcaattcgc
ttcctgtttgagcgccacgaagccgaagtgctggccatgactgagcatctgaaacataac
cagtttgccagctatgaagcggcgcttggccagtttgcgacaaactatcaggccgagttt
gccgagtggatgaatggcctggcgccgcaaaaggcaaaggcgcaggacagtaagcgtgaa
cagatgctgctgcgtcatgctgagcacaaagggcgccagtaa
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