Shewanella amazonensis: Sama_1801
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Entry
Sama_1801 CDS
T00445
Name
(GenBank) conserved hypothetical protein
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saz03016
]
Sama_1801
Transfer RNA biogenesis [BR:
saz03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Sama_1801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ABM00007
UniProt:
A1S6K0
LinkDB
All DBs
Position
2192916..2193875
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AA seq
319 aa
AA seq
DB search
MSDVVQDELSKKQTTRLNKLQKRLRREVGSAIADYNMIEEGDRVMCCLSGGKDSYAMLDI
LINLQQRAPVSFEIVAVNLDQKQPGFPEHVLPAYLETLGVPFHILEKDTYSIVKDKIPEG
KTTCSLCSRLRRGTLYGFAQRIGATKIALGHHRDDIIETLFLNMFYGGKMKAMPPKLLSD
DGANVVIRPLAYCREKDIAEYAELKQFPIIPCNLCGSQENLKRAAVKDMLKQWDRQHPGR
IETIFTAMQNTAPSQGVDREQFDFVSLKQDPNAEFRGDVAEADLPAFDFMDTANSGHINL
DDASKRQGTRIDVVSTFTP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgtagtgcaagacgaactttccaagaaacaaactacccgcctcaacaaactt
caaaagcgacttcgccgcgaagttggcagcgctattgctgattacaacatgattgaagaa
ggtgacagagtcatgtgctgtctgtccggtggcaaagacagctatgccatgctggatatt
ctgatcaatctgcagcaacgtgcccctgtttcttttgaaattgtggccgttaacctggat
cagaagcagccaggcttccctgagcatgtgctgcctgcctaccttgagaccctgggtgtg
ccttttcatattcttgagaaagacacttattccatcgttaaagacaagatcccggaaggc
aagaccacctgttctttgtgttcacgcctgcgtcgaggcaccctgtatggatttgcccag
cggattggtgccaccaaaattgctttggggcaccacagggacgacattattgagaccctg
ttcctgaacatgttctatggcggcaaaatgaaagccatgccgcccaagctgttgtcggac
gatggtgccaacgtggttatccgccccctcgcctattgccgcgaaaaagacattgccgag
tatgccgagctgaagcagttccccattattccctgtaacctctgtggatctcaggaaaac
ctcaagcgtgctgcggtaaaagacatgcttaagcagtgggaccgtcagcatcctggtcgt
attgaaaccatctttactgccatgcagaatactgcaccttcccagggcgtcgaccgcgag
caattcgactttgtctcgctcaaacaggatcccaacgcggaatttcgcggtgatgtagca
gaagctgatttgcccgcctttgactttatggacacggcaaacagtggtcatatcaatctg
gacgatgccagcaaacgtcagggcacccgcatcgatgtggtatcgacctttaccccctga
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