Shewanella amazonensis: Sama_1840
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Entry
Sama_1840 CDS
T00445
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
saz
Shewanella amazonensis
Pathway
saz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sama_1840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saz03400
]
Sama_1840
DNA repair and recombination proteins [BR:
saz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sama_1840
RecFOR pathway proteins
Sama_1840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
RecR_HhH
IMS_HHH
Transposase_20
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ABM00046
UniProt:
A1S6N9
LinkDB
All DBs
Position
complement(2241369..2241986)
Genome browser
AA seq
205 aa
AA seq
DB search
MIGRLKGILVEKHAPEVLIDVGGVGYELQMPLTSFYELPLPGAEVIVYTHFVVREDAQLL
YGFIHKEERSLFRLLIKANGVGPKLALTILSGMTAKEFIGCLERDDIATLIKLPGVGKKT
AERLLVEMRDKLKSLMEASMGAEREFVLKSNFTPAPVAATVEEDAIAALLSLGYKPQQAS
KAVSSAFQEGMDPEQLIKAALKSML
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgataggtcgtttaaagggcattttggttgagaaacacgccccagaggtattgatagat
gtgggcggtgttggctatgagctgcaaatgccgctgacctccttttacgagctgccactg
cctggcgccgaggtcattgtttatacccattttgtggtccgtgaagatgctcagcttttg
tatggatttatccataaagaagagcgctcactgtttcgtttgctgatcaaggccaatggt
gttggccccaagctcgcgctcactattctgtcgggcatgaccgccaaagagtttattggt
tgcctggaacgtgacgatatcgcgaccctgattaagctgcccggtgtgggtaaaaagact
gccgaacgtctgctggttgagatgcgcgacaaactcaagagcctgatggaagcctccatg
ggcgctgagcgagagtttgtgcttaagagcaacttcacaccggcgccggtggctgccact
gtggaagaagatgccatagccgcgctcttgtcattgggctacaaaccgcagcaggcaagc
aaagccgtatccagtgccttccaggagggcatggatcccgagcagcttatcaaggctgca
cttaagtccatgctctaa
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