Shewanella amazonensis: Sama_1895
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Entry
Sama_1895 CDS
T00445
Name
(GenBank) soluble lytic murein transglycosylase, putative
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
saz01011
]
Sama_1895
Enzymes [BR:
saz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Sama_1895
Peptidoglycan biosynthesis and degradation proteins [BR:
saz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Sama_1895
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
ABM00101
UniProt:
A1S6U4
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All DBs
Position
2311492..2313408
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AA seq
638 aa
AA seq
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MLKQFYGICLTSLIFISPLVSADIKDDRQQFLKAEKALREGNKAQYAKLRKGLDDYPLAV
YLDFDAQIDSLVMLPGSKAQTAIQAFQNTPFYGNARYRYLLTAAKGARWEDFLAISPDAP
KDTALQCHYYQALLAVGDKSRANEGARRLWLNGSSMPDACDPLFTKWAKAGHRSQELIWS
RMFLAFDAREASLLSYLAQKVTNYPKEAQKLLALYKDPRNLRHMDRYKAKAPVMAEMVEL
GLKALARKDLKEAVSLLGKYEKSGRFTKVQAQSLHAFMVRRVLLRQEESLLSYAEKHLPP
LASDDLTELRLRWAIRDGDEKAIKQFLPLLSRETAAKERWQYWRLRYETSAGESDTLSAQ
LAADRSFYGFHAAQSQGMSPALNEVKASDVSASSDANLTQGADPALARVKELLVLERPRQ
ARVEWLGLLGREDAAGKAKYGNWALENGLFALSVDASIQGKFWDDLGMRFPPAEEQSFAR
AAKRHKLNAEELRAIARRESAFNPIAQSAVGARGLMQLMPATAKQTAKKQGIKYSGEGSL
YEPALNIQLGSAYYASLLERYNNNRVLATAAYNAGPSRVNAWLARSEGKLDVMAFIESIP
FTETREYVQAVFSYRLIYEHRKGNTTPLFSEAELKFKY
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcagttttacggcatttgtctcacatcactcatcttcatcagcccgctggtg
tctgccgatatcaaggatgaccggcaacagtttctcaaggcggaaaaagccctgcgggag
ggtaataaggcccagtatgccaagttgagaaaaggcctggatgattaccccctggccgtt
tatctcgactttgatgcccaaatcgacagtctggtgatgctgccggggagtaaagcccaa
acggcgattcaggcatttcagaatacgcctttttatggcaacgcccgctaccgttacctg
ctcaccgcagccaagggggctcgctgggaagattttctggccattagcccggacgcgcca
aaagataccgcgctccaatgccactactatcaggccttactggccgtgggtgacaaatcc
cgagccaatgagggggcccgccgcttatggctaaacggcagctcaatgccggatgcctgc
gatcccttgtttacaaaatgggccaaagcaggccatcgcagtcaggagctcatctggagc
cgtatgttcctcgcctttgatgcccgggaagcgtcactcctgagctacctggcccaaaag
gttaccaattaccccaaagaagcccaaaagctgcttgccctgtacaaagatccgagaaac
ctcaggcacatggacagatacaaggccaaagcgcctgtcatggccgaaatggtagagttg
ggactcaaggcgctggcacgcaaagatttaaaagaagccgtgtcattgctgggtaaatac
gaaaaatcaggccgtttcaccaaggtacaggcacaaagcctgcacgcctttatggtccgc
cgagtgttactcagacaagaagagtctctgctgagctatgccgaaaaacacctgccacca
ctcgcatcggacgatctgacagagctgaggcttcgctgggcgatacgggatggtgacgaa
aaagccataaagcagtttctgccgctgttaagccgtgaaacggctgccaaggaacgctgg
caatattggcgtctcaggtacgagaccagcgctggcgagagtgacaccctctcggcgcag
ctggctgccgacagaagtttttacggatttcatgctgcgcaatctcagggcatgagccca
gcgctcaatgaggttaaagcgagtgatgtatccgcttcctctgatgccaatctcacgcag
ggagcagatcccgctctggccagggtaaaagagctcctggtcttggagcggccacgtcag
gctcgtgtggaatggctaggactgcttggtcgggaagatgctgccggcaaggcaaaatat
ggcaactgggcgctggaaaatgggctgttcgccctctccgttgatgcgtctattcaaggc
aaattctgggatgatttgggcatgcgcttccctcccgccgaagagcaaagctttgccaga
gccgctaaacgccataagctcaatgcggaagaactgagagccatcgcccgccgtgaaagc
gcgtttaaccccatagcgcagtccgctgtgggtgcccgggggttgatgcagttgatgcca
gccacagcgaaacaaaccgccaaaaaacaaggcataaagtacagcggcgagggatcgctg
tacgagccagcactgaatattcagctgggcagtgcctattacgcaagtttactcgagcgg
tataacaataatcgggtactggcaacggcggcctataacgccggaccatcgagggtgaac
gcctggcttgctcgcagtgagggtaaactggatgtgatggccttcatcgaatccatccca
ttcaccgagacccgggagtacgtgcaggccgtattcagttatcgattaatttacgagcat
cgaaaaggcaataccacgccccttttcagcgaggctgagctgaaattcaaatactga
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