Shewanella amazonensis: Sama_1924
Help
Entry
Sama_1924 CDS
T00445
Name
(GenBank) transcriptional regulator, GntR family
KO
K03603
GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saz03000
]
Sama_1924
Transcription factors [BR:
saz03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Sama_1924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FadR_C
GntR
FCD
HTH_Crp_2
TrmB
HTH_IclR
HTH_24
Fe_dep_repress
PaaX
LexA_DNA_bind
MarR_2
Rrf2
HVO_A0261_N
MarR
Motif
Other DBs
NCBI-ProteinID:
ABM00130
UniProt:
A1S6X3
LinkDB
All DBs
Position
complement(2352404..2353126)
Genome browser
AA seq
240 aa
AA seq
DB search
MIINAKGPASFAEKYIVRSIWENKFPPGSILPAERELSELIGVTRTTLREVLQRLARDGW
LTIQHGKPTRVNNFWETSGLNILETIADLNPEGFPVLVDQLLSARTNVSAIYFRGALRHN
PETAVEILARIHGMEDSAEAYAEFDYDLHHTLAFSSGNPLYVLILNGFKGLYSRVGRYYF
SSAEARKLAMDFYIELEKLAKRHAYGEVPALMRSYGINSGKMWQKLKDAMPADINQDPHG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgataatcaatgccaaaggtcctgcgagtttcgcagagaaatacatagtgcgttccatt
tgggaaaataaatttccccctggctccattcttcctgccgagcgtgagctttcagagctt
atcggtgtaacccgtaccacattgagggaagtgttgcagcgtttggcccgcgatggctgg
ctcactatccagcacggtaagccaacccgggtaaataatttctgggaaacgtcaggcctg
aatattttggaaaccattgcggacttgaatcctgaggggtttccggtgttggttgaccag
ttgttatcggcccgaacgaatgtcagcgctatctatttccgtggcgcactgcgtcacaat
ccagaaaccgcagtagaaatccttgcccgtatccatggtatggaagattcggctgaagca
tatgctgagttcgattacgatttgcatcacacgctagccttttcatcgggtaacccgctt
tatgtgttaatcctgaacggttttaaaggactttacagtcgggtaggccgctattacttc
tccagcgctgaagcacgaaagttggcgatggatttttatattgagctggaaaagctggca
aagcgtcatgcgtacggggaagtaccggcgctgatgcgaagctatggcattaacagcggc
aaaatgtggcaaaagctgaaagacgccatgcccgctgatattaatcaggatccacacggt
taa
DBGET
integrated database retrieval system
